Detailed information NTG1122520

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL201_RS13860
• Genome accession: NZ_LR134380
• Coordinates: 3080370..3081437 (-)
• Length: 355 a.a.
• NCBI ID: WP_027222818.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pascullei strain NCTC12273
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3075370..3086437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL201_RS13835 (NCTC12273_02771)	-	3075561..3076277 (-)	717	WP_027222813.1	dienelactone hydrolase family protein	-
EL201_RS13840 (NCTC12273_02772)	-	3076552..3077418 (+)	867	WP_027222814.1	alpha/beta hydrolase	-
EL201_RS13845 (NCTC12273_02773)	rpoH	3077659..3078513 (-)	855	WP_027222815.1	RNA polymerase sigma factor RpoH	-
EL201_RS13850 (NCTC12273_02774)	ftsX	3078810..3079739 (-)	930	WP_027222816.1	permease-like cell division protein FtsX	-
EL201_RS13855 (NCTC12273_02775)	ftsE	3079733..3080383 (-)	651	WP_027222817.1	cell division ATP-binding protein FtsE	-
EL201_RS13860 (NCTC12273_02776)	pilA	3080370..3081437 (-)	1068	WP_027222818.1	signal recognition particle-docking protein FtsY	Machinery gene
EL201_RS13865 (NCTC12273_02777)	-	3081500..3082825 (+)	1326	WP_027222819.1	M16 family metallopeptidase	-
EL201_RS13870 (NCTC12273_02778)	-	3082822..3084126 (+)	1305	WP_027222820.1	M16 family metallopeptidase	-
EL201_RS13875 (NCTC12273_02779)	rsmD	3084123..3084668 (+)	546	WP_027222821.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL201_RS13880 (NCTC12273_02780)	dotD	3084743..3085234 (+)	492	WP_027222822.1	type IVB secretion system lipoprotein DotD	-
EL201_RS13885 (NCTC12273_02781)	dotC	3085215..3086126 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38871.45 Da
• Isoelectric Point: 6.1219

>NTDB_id=1122520 EL201_RS13860 WP_027222818.1 3080370..3081437(-) (pilA) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MIKWFKRNQNSESSLDTEEQQAHAENSVESGLEEPREAIVKEPSPKESIFARFKKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQEVLKQLNEGLARKQLSNGEAVYQTLKANLQKILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNSIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1122520 EL201_RS13860 WP_027222818.1 3080370..3081437(-) (pilA) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAGTCAAGTTTGGACACTGAAGAACAACAGGCTCATGCCGAAAACAG
CGTGGAATCCGGGCTTGAAGAGCCTCGGGAGGCGATTGTCAAAGAGCCTTCTCCAAAAGAAAGTATTTTTGCTCGTTTTA
AGAAAGGTCTTAGCAAAACGCGCCATCAATTGGGGGAAGGCATAAGTCGGCTGCTATTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAACTCGAGACCTTATTGATTAGTGCTGATTTGGGCTTGGATACCACGCAAGAAGTATTGAAGCAATT
AAATGAAGGCCTGGCAAGAAAGCAACTATCTAATGGTGAAGCAGTTTATCAGACTCTAAAGGCAAATTTGCAAAAGATTT
TGAGTCAAGAAGAGAAACCGCTTTCCATAGAAACAGAAGATGGTTCTCCTTTTGTCATTTTAATGGTTGGTGTCAATGGC
GCCGGTAAAACAACCACGATTGGTAAATTAGCCAAACAATTCCAAAAACAGGGAAAGAAAGTGATGTTAGCTGCTGGTGA
TACGTTTCGTGCTGCTGCCGTGGAACAATTGCATGTGTGGGGCGAAAGAAATAGCATACCGGTTATTGCCCAGCATACCG
GGGCTGACAGTGCCTCAGTAATTTTTGATGCCCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACACAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTGATGCAGAAACTCGATCCCAA
AGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATCGGGCAGAATGCCTTGGCCCAGGCAAAACAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGAACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCATTTCGTTATTTAGGGGTGGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.453	96.901	0.499