Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | EL201_RS10255 | Genome accession | NZ_LR134380 |
| Coordinates | 2262759..2263073 (-) | Length | 104 a.a. |
| NCBI ID | WP_027222173.1 | Uniprot ID | A0AAX2IXJ9 |
| Organism | Legionella pneumophila subsp. pascullei strain NCTC12273 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2257759..2268073
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL201_RS10230 (NCTC12273_02054) | - | 2258168..2258668 (-) | 501 | WP_027222168.1 | hypothetical protein | - |
| EL201_RS10235 (NCTC12273_02055) | - | 2259160..2260020 (+) | 861 | WP_027222169.1 | polysaccharide deacetylase family protein | - |
| EL201_RS10240 (NCTC12273_02056) | - | 2260154..2261350 (-) | 1197 | WP_027222170.1 | murein transglycosylase A | - |
| EL201_RS10245 (NCTC12273_02057) | lpp1976 | 2261460..2262017 (-) | 558 | WP_027222171.1 | hypothetical protein | Machinery gene |
| EL201_RS10250 (NCTC12273_02058) | lpp1977 | 2262014..2262757 (-) | 744 | WP_027222172.1 | PilW family protein | Machinery gene |
| EL201_RS10255 (NCTC12273_02059) | lpp1978 | 2262759..2263073 (-) | 315 | WP_027222173.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| EL201_RS10260 (NCTC12273_02060) | hisC | 2263234..2264343 (+) | 1110 | WP_027222174.1 | histidinol-phosphate transaminase | - |
| EL201_RS10265 (NCTC12273_02061) | - | 2264381..2264722 (+) | 342 | WP_027222175.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| EL201_RS10270 (NCTC12273_02062) | secF | 2264906..2265823 (-) | 918 | WP_027222176.1 | protein translocase subunit SecF | - |
| EL201_RS10275 (NCTC12273_02063) | secD | 2265836..2267692 (-) | 1857 | WP_027222177.1 | protein translocase subunit SecD | - |
| EL201_RS10280 (NCTC12273_02064) | yajC | 2267714..2268049 (-) | 336 | WP_027222178.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12319.50 Da Isoelectric Point: 10.1757
>NTDB_id=1122512 EL201_RS10255 WP_027222173.1 2262759..2263073(-) (lpp1978) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MNKQKGFTLMEVLMSLMLMTTVVLMLVEQRLKTRDLINHLIWRIHGSQFLDQVDEALYIGENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYNLDAN
MNKQKGFTLMEVLMSLMLMTTVVLMLVEQRLKTRDLINHLIWRIHGSQFLDQVDEALYIGENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYNLDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1122512 EL201_RS10255 WP_027222173.1 2262759..2263073(-) (lpp1978) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAGTACTAATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
AGAGCAACGGTTGAAAACCAGAGATTTGATCAATCATCTTATCTGGCGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATTGGTGAGAATAGATTACCCCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAACGTTACGTGGTTTAAAAAAAGCCAATCAATTATTCGCTCTTATAATCTGGATGCTAATTGA
ATGAACAAGCAAAAGGGTTTCACCCTAATGGAAGTACTAATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
AGAGCAACGGTTGAAAACCAGAGATTTGATCAATCATCTTATCTGGCGAATTCACGGTTCCCAATTTTTAGATCAAGTAG
ATGAAGCATTATATATTGGTGAGAATAGATTACCCCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAACGTTACGTGGTTTAAAAAAAGCCAATCAATTATTCGCTCTTATAATCTGGATGCTAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila str. Paris |
90.385 |
100 |
0.904 |
| lpp1978 | Legionella pneumophila strain ERS1305867 |
90.385 |
100 |
0.904 |