Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   EL201_RS07125 Genome accession   NZ_LR134380
Coordinates   1548736..1549077 (+) Length   113 a.a.
NCBI ID   WP_027221582.1    Uniprot ID   A0AAX2IVA6
Organism   Legionella pneumophila subsp. pascullei strain NCTC12273     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1543736..1554077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL201_RS07100 (NCTC12273_01429) acpP 1544563..1544811 (+) 249 WP_003631752.1 acyl carrier protein -
  EL201_RS07105 (NCTC12273_01430) fabF 1544831..1546069 (+) 1239 WP_027221578.1 beta-ketoacyl-ACP synthase II -
  EL201_RS07110 (NCTC12273_01431) mltG 1546070..1547068 (+) 999 WP_027221579.1 endolytic transglycosylase MltG -
  EL201_RS07115 (NCTC12273_01432) tmk 1547068..1547706 (+) 639 WP_027221580.1 dTMP kinase -
  EL201_RS07120 (NCTC12273_01433) - 1547703..1548608 (+) 906 WP_027221581.1 DNA polymerase III subunit delta' -
  EL201_RS07125 (NCTC12273_01434) pilZ 1548736..1549077 (+) 342 WP_027221582.1 PilZ domain-containing protein Machinery gene
  EL201_RS07130 (NCTC12273_01435) - 1549133..1549921 (+) 789 WP_027221583.1 TatD family hydrolase -
  EL201_RS07135 (NCTC12273_01436) - 1550047..1551147 (+) 1101 WP_027221584.1 anhydro-N-acetylmuramic acid kinase -
  EL201_RS07140 (NCTC12273_01437) - 1551203..1552495 (+) 1293 WP_027221585.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12469.49 Da        Isoelectric Point: 8.2421

>NTDB_id=1122498 EL201_RS07125 WP_027221582.1 1548736..1549077(+) (pilZ) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MTEKPQLINCSFPNEATLYIAYMPFVKGGGLFIRTQHVYPLGQSLELSVKLLNENEPYLVAGKVVWITPKGAQGNKPPGV
GVQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=1122498 EL201_RS07125 WP_027221582.1 1548736..1549077(+) (pilZ) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCAACTTTATATATAGCTTATATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATCCTTTAGGACAATCACTTGAATTATCGGTTAAGTTACTCAATG
AAAATGAACCTTATTTGGTCGCTGGTAAAGTAGTCTGGATTACTCCTAAAGGTGCGCAAGGTAATAAGCCTCCGGGAGTT
GGTGTTCAATTTACTGGAGAAAATAGTCGTTATTTATGTAATAAGATAGAAACCTATTTGGCGGGAATGTTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(9-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

94.69

100

0.947
  pilZ Legionella pneumophila strain ERS1305867

94.69

100

0.947

Multiple sequence alignment