Detailed information NTG1122489

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: EL201_RS03295
• Genome accession: NZ_LR134380
• Coordinates: 691976..692680 (-)
• Length: 234 a.a.
• NCBI ID: WP_027223686.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pascullei strain NCTC12273
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 686976..697680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL201_RS03280 (NCTC12273_00655)	-	689851..690363 (-)	513	WP_027223683.1	pilus assembly protein	-
EL201_RS03285 (NCTC12273_00656)	-	690360..691427 (-)	1068	WP_027223684.1	PilW family protein	-
EL201_RS03290 (NCTC12273_00657)	pilV	691424..691963 (-)	540	WP_027223685.1	type IV pilus modification protein PilV	-
EL201_RS03295 (NCTC12273_00658)	fimT	691976..692680 (-)	705	WP_027223686.1	GspH/FimT family pseudopilin	Machinery gene
EL201_RS03300 (NCTC12273_00659)	-	692895..693758 (-)	864	WP_027223687.1	polysaccharide deacetylase family protein	-
EL201_RS03305 (NCTC12273_00660)	-	693934..695283 (-)	1350	WP_080273326.1	lpg0634 family Dot/Icm T4SS effector	-
EL201_RS03310 (NCTC12273_00661)	-	695558..697039 (+)	1482	WP_027223689.1	ArnT family glycosyltransferase	-

Sequence

Protein

• Length: 234 a.a.
• Molecular weight: 24957.58 Da
• Isoelectric Point: 7.9577

>NTDB_id=1122489 EL201_RS03295 WP_027223686.1 691976..692680(-) (fimT) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MNKVIRESQRFTVRNVATLLFCVDTSVLPTKSNIAQNKETKIIYNHLCKDSFDTEIPLNSSPLSIAGFTLVELLVTLSVF
AIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPEAGTPTLL
KTHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGATPGQAVWNNGALNCP

Nucleotide

• Length: 705 bp

>NTDB_id=1122489 EL201_RS03295 WP_027223686.1 691976..692680(-) (fimT) [Legionella pneumophila subsp. pascullei strain NCTC12273]
TTGAACAAAGTGATAAGGGAATCACAAAGGTTCACTGTGCGCAATGTCGCTACTTTATTATTTTGTGTGGACACAAGTGT
GTTGCCCACAAAATCTAATATAGCACAAAATAAAGAAACAAAAATAATATACAATCACCTTTGCAAAGACAGCTTTGATA
CTGAAATCCCCCTTAACAGTAGCCCTCTTTCTATAGCAGGATTCACACTGGTTGAGTTATTAGTCACCCTATCTGTTTTC
GCCATCATCTTAACTCTAATTGTACCTTCATTAAGGACAATGATTTTGAATAACCGTTTGACTTCAAACATTGATTCATT
GGTAAGCTCATTAAATTATGCACGCGGAGTGGCACTTGATCGGGCCGTCAATGTAGCAGTATGTCCGTTAGGCTCACCAG
GTTCAACAGCATGTGGCGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCCGAAGCCGGCACACCCACTCTTTTA
AAAACTCACCAAACCTCAGTGAATGACCCTGTTATCACATCTAATGTATCCAGTGTTGTTTTTGACCCGCATGGATTATC
AACTACCCAAAGTAACTTTACTATGTGTGATAACCGAGGAAATGCGTTTGCCCGATCTGCAATGGTTTTGGCTACCGGAT
TTGTCCAATCTGGAGCAACACCCGGCCAGGCTGTCTGGAATAATGGGGCTCTAAACTGCCCTTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (66-87)

• Type II transport protein GspH (GspH) (105-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	89.787	100	0.902