Detailed information NTG1122484

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: EL201_RS00695
• Genome accession: NZ_LR134380
• Coordinates: 156385..157077 (+)
• Length: 230 a.a.
• NCBI ID: WP_027223240.1
• Uniprot ID: A0AAX2IS38
• Organism: Legionella pneumophila subsp. pascullei strain NCTC12273
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 151385..162077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL201_RS00675 (NCTC12273_00132)	-	152004..152180 (-)	177	WP_080273224.1	dodecin domain-containing protein	-
EL201_RS00680 (NCTC12273_00133)	-	152358..154826 (+)	2469	WP_027223237.1	hypothetical protein	-
EL201_RS00685 (NCTC12273_00134)	dapB	154924..155655 (-)	732	WP_027223238.1	4-hydroxy-tetrahydrodipicolinate reductase	-
EL201_RS00690	-	155842..156027 (-)	186	WP_027223239.1	hypothetical protein	-
EL201_RS00695 (NCTC12273_00135)	rocC	156385..157077 (+)	693	WP_027223240.1	ProQ/FINO family protein	Regulator
EL201_RS00700 (NCTC12273_00136)	-	157078..158148 (+)	1071	WP_027223241.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25742.66 Da
• Isoelectric Point: 10.7030

>NTDB_id=1122484 EL201_RS00695 WP_027223240.1 156385..157077(+) (rocC) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLQGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVSGKVVTHSHVNNQQSTISSIKPINS
IDSHPEPVLPVYPLRSSAYTSQNTAMQSAKPSSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE

Nucleotide

• Length: 693 bp

>NTDB_id=1122484 EL201_RS00695 WP_027223240.1 156385..157077(+) (rocC) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTTATCAATAAAGCACAAAAAAATCAATCCAAACGTGCACGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTTCCTGAGGCATTTGATAATTCTTTGCGTATCCGGCCATTAAAGATTGGTATTA
TGTCTGACATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGAGAAGCGGTTGTTCTT
TTTACCCGTCGTCTCGATTATCTGGCTTGCTTAAAGGCTCGTGAAGTCCGTATCGATTTGCAAGGAAATCCAGTAGCGGA
GGTTACGGAAGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGTGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTAAGTGGAAAAGTAGTTACTCATTCGCATGTCAATAATCAACAGAGTACAATTTCCAGCATTAAGCCAATCAATTCA
ATTGACTCTCATCCTGAGCCTGTTTTGCCAGTATATCCCCTCAGAAGTTCTGCGTATACATCACAAAATACGGCCATGCA
ATCCGCCAAGCCATCATCCGTAGTAGTCAAACATAAAGCGCCAAAGCAATATGATCCGGATGCCGTAGCTCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAGAAGGAAACGGCAGAATAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	90	100	0.9