Detailed information NTG1122407

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL239_RS07245
• Genome accession: NZ_LR134374
• Coordinates: 1644487..1645554 (-)
• Length: 355 a.a.
• NCBI ID: WP_126338912.1
• Uniprot ID: -
• Organism: Legionella spiritensis strain NCTC12082
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1639487..1650554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL239_RS07220 (NCTC12082_01466)	-	1640174..1640359 (-)	186	WP_058483141.1	CBU_0585 family protein	-
EL239_RS07225 (NCTC12082_01467)	-	1640458..1641438 (+)	981	WP_126338911.1	adenosine deaminase	-
EL239_RS07230 (NCTC12082_01468)	rpoH	1641967..1642830 (-)	864	WP_172597065.1	RNA polymerase sigma factor RpoH	-
EL239_RS07235 (NCTC12082_01469)	ftsX	1642921..1643850 (-)	930	WP_058483138.1	permease-like cell division protein FtsX	-
EL239_RS07240 (NCTC12082_01470)	ftsE	1643844..1644494 (-)	651	WP_058483137.1	cell division ATP-binding protein FtsE	-
EL239_RS07245 (NCTC12082_01471)	pilA	1644487..1645554 (-)	1068	WP_126338912.1	signal recognition particle-docking protein FtsY	Machinery gene
EL239_RS07250 (NCTC12082_01472)	-	1645616..1646941 (+)	1326	WP_058483135.1	M16 family metallopeptidase	-
EL239_RS07255 (NCTC12082_01473)	-	1646938..1648242 (+)	1305	WP_126338913.1	M16 family metallopeptidase	-
EL239_RS07260 (NCTC12082_01474)	rsmD	1648239..1648784 (+)	546	WP_058483133.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL239_RS07265 (NCTC12082_01475)	dotD	1648874..1649356 (+)	483	WP_058483132.1	type IVB secretion system lipoprotein DotD	-
EL239_RS07270 (NCTC12082_01476)	-	1649337..1650254 (+)	918	WP_058483131.1	type IV secretion system DotC family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38265.62 Da
• Isoelectric Point: 7.1482

>NTDB_id=1122407 EL239_RS07245 WP_126338912.1 1644487..1645554(-) (pilA) [Legionella spiritensis strain NCTC12082]
MIKWFKRNQDANSSAPQSVEQESNGQLPVDEKLPVSSPVSDSSTERNKQGIYSRFKHGLTKTRHQLGEGLGRLLLGRKEI
DAALLEEVESLLLSADIGLEATQRIVQQLGDGLARRQLADGEAVIGSLKNHLQALLTEHGKPLIPQTADHSPFVILTVGV
NGAGKTTTIGKLARQFQSQGKKVMLAAGDTFRAAAIEQLQAWGERNKIPVIAQQTGADSASVIFDALQAAKARGIDILIA
DTAGRLHTQGNLMEELKKVKRVIKKLDADAPHETMLVLDASIGQNALNQAREFNQAVGVTGITMTKLDGTAKGGILFAIA
NELGIPFRYLGIGEGIDDLRPFDAAQFVRAIFNDD

Nucleotide

• Length: 1068 bp

>NTDB_id=1122407 EL239_RS07245 WP_126338912.1 1644487..1645554(-) (pilA) [Legionella spiritensis strain NCTC12082]
ATGATTAAATGGTTTAAAAGAAATCAGGATGCTAACAGCTCAGCTCCCCAATCTGTGGAGCAGGAATCGAATGGACAATT
GCCGGTTGATGAAAAATTGCCCGTTTCGTCGCCGGTTTCCGACTCTTCCACAGAACGGAATAAGCAGGGGATTTACAGTC
GATTCAAGCATGGCCTGACCAAAACACGCCACCAGCTGGGTGAAGGGCTAGGGCGTCTGTTACTGGGGCGGAAGGAAATT
GACGCGGCCTTGCTGGAAGAGGTTGAATCGTTACTCTTGAGTGCCGATATCGGCCTTGAGGCGACCCAAAGAATAGTACA
GCAACTCGGCGACGGTCTGGCACGTCGTCAATTAGCGGATGGCGAGGCGGTTATCGGTTCGTTAAAAAACCACTTGCAGG
CCTTGCTGACCGAACATGGCAAACCTTTAATTCCCCAAACGGCTGATCATTCTCCGTTTGTTATTTTAACCGTAGGCGTC
AATGGTGCCGGGAAAACGACCACCATCGGCAAATTGGCCAGACAGTTTCAATCACAAGGCAAGAAAGTGATGCTGGCTGC
CGGCGACACGTTTCGCGCCGCGGCAATCGAGCAGCTCCAGGCCTGGGGCGAGCGCAACAAGATACCTGTTATTGCCCAGC
AAACAGGTGCCGACAGCGCTTCGGTGATATTTGACGCGTTACAAGCCGCCAAAGCACGGGGGATTGATATACTTATCGCT
GATACGGCGGGCCGCTTGCATACCCAGGGTAATTTGATGGAAGAGTTGAAAAAAGTGAAGCGGGTTATTAAGAAACTCGA
CGCCGACGCGCCGCATGAAACGATGCTGGTTCTGGATGCCAGTATAGGACAAAACGCGTTGAATCAGGCGCGTGAATTCA
ATCAGGCTGTCGGTGTAACCGGCATAACCATGACAAAACTCGATGGAACGGCCAAGGGCGGTATTTTATTTGCCATAGCC
AATGAATTAGGGATACCATTTCGTTATCTAGGGATTGGAGAAGGGATTGATGATTTGCGCCCCTTCGATGCGGCACAATT
TGTCAGGGCGATTTTTAACGATGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (66-131)

• SRP54-type protein, GTPase domain (SRP54) (152-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.591	88.169	0.49