Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   EL239_RS03925 Genome accession   NZ_LR134374
Coordinates   907182..908444 (-) Length   420 a.a.
NCBI ID   WP_058484149.1    Uniprot ID   A0A0W0YXP8
Organism   Legionella spiritensis strain NCTC12082     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 902182..913444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL239_RS03915 (NCTC12082_00795) - 904682..905938 (-) 1257 WP_126338334.1 hypothetical protein -
  EL239_RS03920 (NCTC12082_00796) - 906283..907005 (+) 723 WP_126338336.1 iron-containing redox enzyme family protein -
  EL239_RS03925 (NCTC12082_00797) lqsT 907182..908444 (-) 1263 WP_058484149.1 sensor histidine kinase Regulator
  EL239_RS03930 (NCTC12082_00798) - 908685..909575 (-) 891 WP_126338338.1 hypothetical protein -
  EL239_RS03935 (NCTC12082_00799) - 909645..910268 (+) 624 WP_126338340.1 tRNA-(ms[2]io[6]A)-hydroxylase -
  EL239_RS03940 (NCTC12082_00800) - 910289..911035 (-) 747 WP_126338342.1 hypothetical protein -
  EL239_RS03945 (NCTC12082_00801) - 911047..911775 (-) 729 WP_126338344.1 UDP-2,3-diacylglucosamine diphosphatase -
  EL239_RS03950 (NCTC12082_00802) minC 911769..912473 (-) 705 WP_126338346.1 septum site-determining protein MinC -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48159.36 Da        Isoelectric Point: 6.4992

>NTDB_id=1122389 EL239_RS03925 WP_058484149.1 907182..908444(-) (lqsT) [Legionella spiritensis strain NCTC12082]
MQRLNNIFHNVYQYIVKQTEDASHQITLFGLVMMVNFPLFGVFWKLESFQLSEEFFLRLLATTLCALLAANKFWPLRVQK
ILPVFWYMTLLYCLPFFFAYLTLLNHGATLWLMNCVSAIFFLLLVTSVLGALVLLCLGVGFAFIYFFYMTGNAFEYIPGS
LSTFSLMITYSAAVIIGALFARDREIIQAGRLSGMRLLAGSLAHDLRTPLASIHMQAELQEMILDKLNNSEVQKILKESL
HKITRGIEMGNQLISMQLHNISRDKFDTSTFTIHSIKYLLEKTLDDYPLEEEQKSLVKLNLDVDFSVWVEEVAFKNLMWN
LLKNSFEFIEETGKGNIMIWLEPGDEKDDFNYLHVRDTAKGLLTKNNDRIFESFFSDRKEGTGVGLAYCKLLMEAAGGGI
TCKGKDREFAHFIVKFPKVD

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1122389 EL239_RS03925 WP_058484149.1 907182..908444(-) (lqsT) [Legionella spiritensis strain NCTC12082]
ATGCAACGTTTAAACAACATTTTTCATAATGTTTATCAATACATAGTAAAACAAACGGAAGATGCCAGTCATCAGATCAC
CTTGTTCGGGCTTGTCATGATGGTTAATTTTCCTCTTTTTGGTGTTTTCTGGAAGCTGGAAAGTTTTCAGCTGAGTGAGG
AATTTTTCCTCAGACTTTTAGCTACAACATTATGTGCCTTGTTAGCGGCAAACAAATTCTGGCCACTTCGTGTGCAAAAA
ATACTTCCTGTCTTCTGGTACATGACCCTGTTGTATTGCCTGCCCTTTTTTTTTGCTTACCTGACCTTGCTTAATCATGG
CGCTACGTTGTGGCTCATGAATTGTGTGTCCGCCATTTTTTTTCTCCTTCTGGTAACCAGTGTTTTGGGTGCACTCGTAT
TATTGTGTCTAGGCGTGGGTTTCGCGTTTATTTATTTTTTTTACATGACCGGTAATGCTTTTGAATACATACCCGGAAGC
CTGTCCACATTCAGTTTGATGATTACTTATAGTGCTGCGGTCATTATTGGTGCCCTGTTTGCCAGGGACAGGGAAATTAT
CCAGGCAGGGCGATTATCGGGCATGCGATTGCTGGCCGGTAGTCTGGCCCATGATCTCAGAACGCCACTCGCCAGTATTC
ATATGCAGGCCGAACTTCAGGAAATGATTCTGGATAAATTAAATAACTCCGAGGTTCAAAAAATATTAAAGGAAAGTCTG
CATAAAATAACCCGCGGGATAGAAATGGGTAATCAGCTTATCAGTATGCAGCTTCACAATATTAGCCGCGATAAATTCGA
CACCAGTACATTTACCATCCACTCCATAAAGTATCTTCTGGAAAAAACACTGGATGATTATCCTCTGGAAGAAGAACAAA
AATCATTGGTCAAGCTGAATCTCGATGTGGATTTTTCAGTCTGGGTTGAAGAAGTCGCATTTAAAAATCTCATGTGGAAT
CTGTTAAAAAACAGTTTTGAATTCATTGAGGAAACCGGCAAGGGCAACATCATGATATGGCTGGAGCCAGGTGATGAGAA
GGATGATTTTAATTATCTGCATGTCAGAGACACGGCCAAGGGCTTGTTGACAAAAAATAATGACAGGATTTTTGAATCCT
TCTTTTCCGATCGCAAGGAAGGAACAGGTGTGGGGCTGGCTTATTGCAAACTTCTCATGGAAGCCGCCGGTGGCGGAATT
ACCTGTAAGGGTAAGGACAGGGAATTCGCTCATTTCATAGTCAAATTTCCCAAGGTTGATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0W0YXP8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

70.476

100

0.705


Multiple sequence alignment