Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | EL168_RS03535 | Genome accession | NZ_LR134366 |
| Coordinates | 697355..697738 (+) | Length | 127 a.a. |
| NCBI ID | WP_011139677.1 | Uniprot ID | Q7MQZ1 |
| Organism | Wolinella succinogenes strain NCTC11488 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 692355..702738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL168_RS03515 (NCTC11488_00730) | minE | 692942..693184 (+) | 243 | WP_011139673.1 | cell division topological specificity factor MinE | - |
| EL168_RS03520 (NCTC11488_00731) | - | 693188..694330 (+) | 1143 | WP_049770681.1 | divergent polysaccharide deacetylase family protein | - |
| EL168_RS03525 (NCTC11488_00732) | - | 694453..696582 (+) | 2130 | WP_011139675.1 | WD40 repeat domain-containing protein | - |
| EL168_RS03530 (NCTC11488_00733) | dprA | 696579..697358 (+) | 780 | WP_011139676.1 | DNA processing protein DprA | Machinery gene |
| EL168_RS03535 (NCTC11488_00734) | dprB | 697355..697738 (+) | 384 | WP_011139677.1 | Holliday junction resolvase RuvX | Machinery gene |
| EL168_RS03540 (NCTC11488_00735) | purH | 697797..699329 (+) | 1533 | WP_011139678.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| EL168_RS03545 (NCTC11488_00736) | hemL | 699341..700636 (+) | 1296 | WP_011139679.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| EL168_RS03550 (NCTC11488_00737) | - | 700629..700925 (+) | 297 | WP_041571895.1 | AtpZ/AtpI family protein | - |
| EL168_RS03555 (NCTC11488_00738) | - | 700922..701464 (+) | 543 | WP_011139681.1 | hypothetical protein | - |
| EL168_RS03560 (NCTC11488_00739) | - | 701470..702159 (-) | 690 | WP_011139682.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14221.51 Da Isoelectric Point: 9.5462
>NTDB_id=1122330 EL168_RS03535 WP_011139677.1 697355..697738(+) (dprB) [Wolinella succinogenes strain NCTC11488]
MIIAVDIGLKRLGVAQYAAGVALPLDPILRKNRHQAARDLDLLLKEKGAQKLVAGIPKEGSSSEEMERRIRHFIGLLEFR
GEVCFVDESYSSKEAFELLRGRSRDRRDGKLDSLSALVILERYLGSL
MIIAVDIGLKRLGVAQYAAGVALPLDPILRKNRHQAARDLDLLLKEKGAQKLVAGIPKEGSSSEEMERRIRHFIGLLEFR
GEVCFVDESYSSKEAFELLRGRSRDRRDGKLDSLSALVILERYLGSL
Nucleotide
Download Length: 384 bp
>NTDB_id=1122330 EL168_RS03535 WP_011139677.1 697355..697738(+) (dprB) [Wolinella succinogenes strain NCTC11488]
ATGATTATTGCTGTGGATATTGGCCTAAAGCGCCTAGGGGTCGCCCAATATGCTGCGGGAGTGGCACTCCCCCTCGACCC
TATCTTGCGTAAAAATCGCCATCAAGCTGCACGCGACCTTGATCTCCTCCTTAAAGAAAAGGGGGCGCAAAAGCTGGTGG
CGGGAATCCCCAAAGAGGGCAGTAGCAGCGAGGAGATGGAGCGAAGAATTCGCCATTTCATTGGACTGCTAGAGTTTAGA
GGGGAAGTCTGCTTTGTAGATGAATCCTATAGCTCCAAAGAGGCTTTTGAGCTCCTTAGGGGGCGGAGTAGAGATCGGCG
TGATGGGAAGCTTGATTCTCTTAGCGCCCTTGTGATTTTGGAGCGATATTTAGGCTCTCTCTAA
ATGATTATTGCTGTGGATATTGGCCTAAAGCGCCTAGGGGTCGCCCAATATGCTGCGGGAGTGGCACTCCCCCTCGACCC
TATCTTGCGTAAAAATCGCCATCAAGCTGCACGCGACCTTGATCTCCTCCTTAAAGAAAAGGGGGCGCAAAAGCTGGTGG
CGGGAATCCCCAAAGAGGGCAGTAGCAGCGAGGAGATGGAGCGAAGAATTCGCCATTTCATTGGACTGCTAGAGTTTAGA
GGGGAAGTCTGCTTTGTAGATGAATCCTATAGCTCCAAAGAGGCTTTTGAGCTCCTTAGGGGGCGGAGTAGAGATCGGCG
TGATGGGAAGCTTGATTCTCTTAGCGCCCTTGTGATTTTGGAGCGATATTTAGGCTCTCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
53.125 |
100 |
0.535 |