Detailed information NTG1122229

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL177_RS12080
• Genome accession: NZ_LR134358
• Coordinates: 2018558..2019811 (+)
• Length: 417 a.a.
• NCBI ID: WP_047919725.1
• Uniprot ID: A0AAX2TQK3
• Organism: Neisseria gonorrhoeae strain NCTC13484
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2013558..2024811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL177_RS12055 (NCTC13484_02078)	-	2014308..2015309 (+)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-
EL177_RS12060 (NCTC13484_02079)	-	2015403..2016251 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
EL177_RS12065 (NCTC13484_02080)	-	2016278..2016760 (+)	483	WP_003694396.1	CinA family protein	-
EL177_RS12070 (NCTC13484_02081)	msrAB	2016844..2018412 (-)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
EL177_RS12080 (NCTC13484_02082)	pilA	2018558..2019811 (+)	1254	WP_047919725.1	signal recognition particle-docking protein FtsY	Machinery gene
EL177_RS12085 (NCTC13484_02083)	-	2020075..2020845 (-)	771	Protein_2060	opacity family porin	-
EL177_RS14605	-	2021274..2021791 (-)	518	Protein_2061	pilin	-
EL177_RS12120 (NCTC13484_02086)	-	2022847..2023244 (-)	398	Protein_2062	pilin	-
EL177_RS12130 (NCTC13484_02087)	lpxC	2023372..2024295 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44359.71 Da
• Isoelectric Point: 4.8123

>NTDB_id=1122229 EL177_RS12080 WP_047919725.1 2018558..2019811(+) (pilA) [Neisseria gonorrhoeae strain NCTC13484]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=1122229 EL177_RS12080 WP_047919725.1 2018558..2019811(+) (pilA) [Neisseria gonorrhoeae strain NCTC13484]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACCTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTGACCGTGATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.52	100	0.995