Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EL147_RS06410 Genome accession   NZ_LR134341
Coordinates   1309145..1309858 (-) Length   237 a.a.
NCBI ID   WP_007893900.1    Uniprot ID   G5K7J7
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1304145..1314858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS10595 (NCTC13786_01278) - 1305919..1306071 (+) 153 WP_007893810.1 hypothetical protein -
  EL147_RS06390 (NCTC13786_01279) - 1306093..1307025 (+) 933 WP_007893821.1 Gfo/Idh/MocA family protein -
  EL147_RS06395 (NCTC13786_01280) - 1307036..1307539 (+) 504 WP_007893867.1 GNAT family N-acetyltransferase -
  EL147_RS06400 (NCTC13786_01281) nrdG 1307546..1308160 (+) 615 WP_007893717.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  EL147_RS06405 (NCTC13786_01282) yaaA 1308281..1309012 (-) 732 WP_007893732.1 peroxide stress protein YaaA -
  EL147_RS06410 (NCTC13786_01283) treR 1309145..1309858 (-) 714 WP_007893900.1 trehalose operon repressor Regulator
  EL147_RS06415 (NCTC13786_01284) treP 1310075..1312069 (+) 1995 WP_007893912.1 PTS system trehalose-specific EIIBC component -
  EL147_RS06420 (NCTC13786_01285) treC 1312135..1313766 (+) 1632 WP_007893800.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27520.80 Da        Isoelectric Point: 9.4542

>NTDB_id=1122015 EL147_RS06410 WP_007893900.1 1309145..1309858(-) (treR) [Streptococcus pseudoporcinus strain NCTC13786]
MKKYDYIFKDLESKISKGVYAIDDFLPTEFQLSKEYNASRDTIRKALTLLVKDGLVKKQQGRGTQVIKHHQILFPISELT
SYHELVTYFNMDSKTNVIAIDKLIVDADMSKLTGFPLHSILWRITRQRVVDGIASVLDIDYLSKDIVPTISREIAEKSLY
HYLEKDLNLAIDFALKEVTIDQVNDKDKILLDLGSDRHLVSVKSKVYLSSNEQFQFTESRHKLEKFKFVDFARRKPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1122015 EL147_RS06410 WP_007893900.1 1309145..1309858(-) (treR) [Streptococcus pseudoporcinus strain NCTC13786]
ATGAAGAAGTACGACTATATATTTAAAGATTTAGAATCAAAAATATCCAAAGGAGTTTACGCTATTGATGATTTTTTACC
AACTGAATTCCAATTAAGCAAAGAATACAATGCTAGTCGTGACACCATTCGCAAAGCTTTAACTCTCTTAGTTAAAGATG
GCTTAGTCAAAAAACAACAAGGTCGAGGAACACAAGTTATTAAACATCATCAGATTCTTTTTCCCATTTCAGAGTTAACA
AGCTATCATGAGTTAGTTACCTATTTTAATATGGACTCTAAAACCAATGTGATTGCTATTGACAAGTTAATTGTGGACGC
TGATATGTCAAAATTGACAGGATTTCCTCTCCATTCCATTCTTTGGCGAATCACTCGCCAAAGGGTTGTTGACGGTATTG
CCTCTGTTCTGGATATTGACTACCTTAGTAAAGATATTGTACCAACTATCAGTCGTGAAATTGCTGAAAAATCCCTTTAC
CACTACCTAGAAAAAGACCTCAACTTAGCCATTGATTTTGCCTTAAAAGAAGTCACCATTGATCAAGTCAATGACAAAGA
TAAAATTTTACTAGATTTAGGCTCAGATCGTCACCTTGTTTCCGTTAAATCAAAAGTCTACCTCTCATCTAATGAACAAT
TCCAGTTTACTGAGAGTCGTCATAAATTAGAAAAATTTAAATTTGTGGATTTTGCACGACGTAAACCCAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5K7J7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.103

98.734

0.633

Multiple sequence alignment