Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL147_RS03635 Genome accession   NZ_LR134341
Coordinates   756685..757728 (-) Length   347 a.a.
NCBI ID   WP_007894008.1    Uniprot ID   G5K9R7
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 751685..762728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS03610 (NCTC13786_00723) - 751758..752702 (-) 945 WP_007893994.1 ABC transporter permease subunit -
  EL147_RS03615 (NCTC13786_00724) - 752705..754183 (-) 1479 WP_007894029.1 sugar ABC transporter ATP-binding protein -
  EL147_RS03620 (NCTC13786_00725) rbsD 754199..754597 (-) 399 WP_007894040.1 D-ribose pyranase -
  EL147_RS03625 (NCTC13786_00726) - 754572..755483 (-) 912 WP_007893981.1 ribokinase -
  EL147_RS03630 (NCTC13786_00727) - 755476..756459 (-) 984 WP_007894011.1 LacI family DNA-binding transcriptional regulator -
  EL147_RS03635 (NCTC13786_00728) sepM 756685..757728 (-) 1044 WP_007894008.1 SepM family pheromone-processing serine protease Regulator
  EL147_RS03640 (NCTC13786_00729) coaD 757715..758206 (-) 492 WP_007893991.1 pantetheine-phosphate adenylyltransferase -
  EL147_RS03645 (NCTC13786_00730) rsmD 758196..758735 (-) 540 WP_007894025.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL147_RS03650 (NCTC13786_00731) asnA 758838..759830 (-) 993 WP_007894038.1 aspartate--ammonia ligase -
  EL147_RS03655 (NCTC13786_00732) - 760074..761600 (+) 1527 WP_007895264.1 IS1182 family transposase -
  EL147_RS03660 (NCTC13786_00733) arcC 761707..762657 (-) 951 WP_007892664.1 carbamate kinase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 38349.34 Da        Isoelectric Point: 10.1350

>NTDB_id=1121995 EL147_RS03635 WP_007894008.1 756685..757728(-) (sepM) [Streptococcus pseudoporcinus strain NCTC13786]
MKIIKKVKWWLISILAVVALLFALFFPLPYYIEMPGGAYDIRSVLKVNDKRDKEKGSYNFVAVSLSRATFAQILYAWVTP
FTEISSLENTTGGYSAADYMRINQYYMETSQNGAIYQALQLAGKPVSLDYLGVYVLDVNKESTFRGILNIADTVTGVNQK
EFKSSTELIKYVSSLKRGETVTVQYTSGNEKKSKSGKLIKLKNGKNGIGIGLTDHTKVHTDEKIEFSTEGVGGPSAGLMF
TLDIYDQLNQENLRKGRRIAGTGTIDQDGKVGDIGGAGLKVVAAANEGADIFFVPNNPVDKRIKKVKPNAKTNYKEALEV
AKKIKTKMKIVPVRNVKEAIAYLQKTK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1121995 EL147_RS03635 WP_007894008.1 756685..757728(-) (sepM) [Streptococcus pseudoporcinus strain NCTC13786]
ATGAAGATAATTAAAAAAGTCAAATGGTGGTTAATTAGTATTCTGGCAGTAGTTGCCCTCTTGTTTGCCCTCTTTTTCCC
TTTACCTTATTATATTGAGATGCCTGGTGGAGCCTACGATATCCGTTCAGTGCTTAAGGTAAACGATAAAAGGGATAAGG
AGAAAGGCTCTTATAATTTTGTGGCGGTCAGTTTGAGTCGAGCCACTTTTGCTCAAATTCTTTATGCTTGGGTAACGCCA
TTCACAGAGATTTCATCTTTGGAAAATACAACTGGTGGCTATAGTGCGGCAGATTATATGCGCATCAATCAATATTACAT
GGAGACCTCTCAAAACGGAGCTATCTATCAAGCCTTACAATTAGCTGGGAAACCTGTTTCTTTAGACTACCTAGGTGTTT
ATGTTTTGGATGTCAATAAAGAGTCTACTTTTCGTGGTATTCTAAATATTGCTGATACTGTTACAGGAGTCAATCAAAAA
GAATTTAAGAGTTCAACTGAACTTATTAAATACGTTTCAAGTTTGAAACGGGGTGAAACAGTGACGGTGCAATATACCAG
CGGTAATGAGAAAAAATCTAAAAGTGGTAAGCTTATTAAGCTAAAAAATGGAAAGAATGGTATTGGAATTGGCTTAACGG
ACCACACAAAAGTCCATACAGATGAAAAGATTGAGTTTTCGACAGAAGGTGTAGGTGGACCAAGTGCTGGGCTTATGTTT
ACACTGGATATTTATGATCAACTAAATCAAGAAAACCTGCGTAAAGGTCGTCGTATTGCTGGTACTGGAACGATTGATCA
AGATGGCAAAGTTGGTGATATTGGTGGTGCAGGATTAAAAGTTGTTGCTGCAGCTAACGAAGGGGCTGATATTTTCTTTG
TACCCAACAATCCAGTTGATAAACGGATCAAAAAAGTAAAACCAAATGCAAAGACCAATTATAAAGAAGCCTTGGAAGTC
GCTAAAAAAATAAAAACCAAGATGAAAATTGTTCCCGTTAGAAATGTCAAAGAAGCTATTGCTTACTTGCAAAAGACAAA
ATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G5K9R7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.884

99.424

0.715


Multiple sequence alignment