Detailed information NTG1121733

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL176_RS13935
• Genome accession: NZ_LR134332
• Coordinates: 3062941..3064008 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain NCTC11193
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3057941..3069008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL176_RS13910 (NCTC11193_02765)	-	3058232..3058948 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
EL176_RS13915 (NCTC11193_02766)	-	3059230..3060096 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
EL176_RS13920 (NCTC11193_02767)	rpoH	3060230..3061084 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
EL176_RS13925 (NCTC11193_02768)	ftsX	3061381..3062310 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
EL176_RS13930 (NCTC11193_02769)	ftsE	3062304..3062954 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
EL176_RS13935 (NCTC11193_02770)	pilA	3062941..3064008 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
EL176_RS13940 (NCTC11193_02771)	-	3064071..3065396 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
EL176_RS13945 (NCTC11193_02772)	-	3065393..3066697 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
EL176_RS13950 (NCTC11193_02773)	rsmD	3066694..3067239 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL176_RS13955 (NCTC11193_02774)	dotD	3067314..3067805 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
EL176_RS13960 (NCTC11193_02775)	dotC	3067786..3068697 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=1121733 EL176_RS13935 WP_015443981.1 3062941..3064008(-) (pilA) [Legionella pneumophila strain NCTC11193]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=1121733 EL176_RS13935 WP_015443981.1 3062941..3064008(-) (pilA) [Legionella pneumophila strain NCTC11193]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501