Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | EL144_RS10305 | Genome accession | NZ_LR134327 |
| Coordinates | 2157953..2158255 (-) | Length | 100 a.a. |
| NCBI ID | WP_032995153.1 | Uniprot ID | A0A336N303 |
| Organism | Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2152953..2163255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL144_RS10290 (NCTC5906_02068) | - | 2153639..2154079 (+) | 441 | WP_032995248.1 | DNA polymerase III subunit psi | - |
| EL144_RS10295 (NCTC5906_02069) | rimI | 2154092..2154535 (+) | 444 | WP_005703805.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| EL144_RS10300 (NCTC5906_02070) | recC | 2154538..2157915 (-) | 3378 | WP_050332837.1 | exodeoxyribonuclease V subunit gamma | - |
| EL144_RS10305 (NCTC5906_02071) | comQ | 2157953..2158255 (-) | 303 | WP_032995153.1 | DUF5374 domain-containing protein | Machinery gene |
| EL144_RS10310 (NCTC5906_02072) | - | 2158239..2158925 (-) | 687 | WP_005703801.1 | DUF2572 family protein | - |
| EL144_RS10315 (NCTC5906_02073) | - | 2158922..2159665 (-) | 744 | WP_032995151.1 | type II secretion system protein J | - |
| EL144_RS10320 (NCTC5906_02074) | comN | 2159652..2160173 (-) | 522 | WP_005701128.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| EL144_RS10335 (NCTC5906_02077) | pal | 2160820..2161284 (-) | 465 | WP_005703799.1 | peptidoglycan-associated lipoprotein Pal | - |
| EL144_RS10340 (NCTC5906_02078) | tolB | 2161299..2162579 (-) | 1281 | WP_050332782.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11738.63 Da Isoelectric Point: 11.0652
>NTDB_id=1121609 EL144_RS10305 WP_032995153.1 2157953..2158255(-) (comQ) [Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906]
MISRLNFIRQKGMSLLSLLVALSLFSGIFLTFNQWGNAQRKSAVEIYQRFQGIQIAENQRQRQFLGLSCERDIYQNHIRF
QVVCRQNQVTVKYPRGEISL
MISRLNFIRQKGMSLLSLLVALSLFSGIFLTFNQWGNAQRKSAVEIYQRFQGIQIAENQRQRQFLGLSCERDIYQNHIRF
QVVCRQNQVTVKYPRGEISL
Nucleotide
Download Length: 303 bp
>NTDB_id=1121609 EL144_RS10305 WP_032995153.1 2157953..2158255(-) (comQ) [Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906]
ATGATTTCACGCCTTAATTTTATTCGACAGAAAGGCATGAGCTTGCTGTCGTTGTTGGTGGCATTAAGTTTATTTAGCGG
TATTTTTCTCACGTTTAACCAATGGGGTAATGCACAACGTAAAAGTGCGGTGGAAATTTACCAACGTTTTCAAGGGATCC
AAATTGCCGAAAATCAACGGCAACGCCAGTTCCTTGGTCTGTCTTGTGAAAGGGATATTTACCAAAATCATATTCGTTTT
CAGGTGGTTTGTCGGCAAAATCAGGTGACGGTGAAATATCCTCGCGGTGAAATTAGTTTATAA
ATGATTTCACGCCTTAATTTTATTCGACAGAAAGGCATGAGCTTGCTGTCGTTGTTGGTGGCATTAAGTTTATTTAGCGG
TATTTTTCTCACGTTTAACCAATGGGGTAATGCACAACGTAAAAGTGCGGTGGAAATTTACCAACGTTTTCAAGGGATCC
AAATTGCCGAAAATCAACGGCAACGCCAGTTCCTTGGTCTGTCTTGTGAAAGGGATATTTACCAAAATCATATTCGTTTT
CAGGTGGTTTGTCGGCAAAATCAGGTGACGGTGAAATATCCTCGCGGTGAAATTAGTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
55.319 |
94 |
0.52 |