Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EL133_RS09595 Genome accession   NZ_LR134323
Coordinates   1869067..1870869 (-) Length   600 a.a.
NCBI ID   WP_006739455.1    Uniprot ID   G5KE76
Organism   Streptococcus urinalis strain NCTC13766     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1864067..1875869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS09585 (NCTC13766_01976) - 1866954..1867310 (+) 357 WP_006740729.1 LPXTG cell wall anchor domain-containing protein -
  EL133_RS09590 (NCTC13766_01977) rcrQ 1867326..1869077 (-) 1752 WP_006739588.1 ABC transporter ATP-binding protein Regulator
  EL133_RS09595 (NCTC13766_01978) rcrP 1869067..1870869 (-) 1803 WP_006739455.1 ABC transporter ATP-binding protein Regulator
  EL133_RS09600 (NCTC13766_01979) - 1870869..1871327 (-) 459 WP_006738845.1 MarR family winged helix-turn-helix transcriptional regulator -
  EL133_RS09605 (NCTC13766_01980) - 1871611..1872162 (-) 552 WP_006740374.1 DUF2812 domain-containing protein -
  EL133_RS09610 (NCTC13766_01981) - 1872149..1872478 (-) 330 WP_006740728.1 PadR family transcriptional regulator -
  EL133_RS09615 (NCTC13766_01982) - 1872580..1873419 (-) 840 WP_006739437.1 SDR family oxidoreductase -
  EL133_RS09620 (NCTC13766_01983) - 1873432..1874166 (-) 735 WP_006738834.1 SDR family oxidoreductase -
  EL133_RS09625 (NCTC13766_01984) - 1874282..1875031 (+) 750 WP_006740264.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66409.20 Da        Isoelectric Point: 8.9331

>NTDB_id=1121548 EL133_RS09595 WP_006739455.1 1869067..1870869(-) (rcrP) [Streptococcus urinalis strain NCTC13766]
MFKIIKRLNAKEWGMIALSTLFICLAVWADLKSPSYMSKITTLLQTKGTTAADIMDPGSKMLLFSFGSFMSAVIVGFLAS
RTAASFTTRLRSDVFNQVIDFSDAEIKQFSVPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAAWALTKIWGKSDHWTMA
VGVAVVIVMILLLFILSVAFPRMRKIQGLTDNLNGTTREILSGIRVVRAYNAEDYQDAKFNKENIALTNLNLFVNRIMAL
MNPVMTVVSSGLTLVIYWIGVHLIDDVTISKTSMALAMSNVKERVSIFSDMVVFSSYAMQVIMGFMMMVAIFIILPRAMV
SAGRINEVLALKPSVNFSEEKAHESVEKGSISFQDVSFRYVKESKDVIEHVSFEAKAGQTVAFIGSTGSGKSTLVNLIPR
LYDVTQGAILVDGINIKDYSHQELNNKVGYIPQKAVLFSGTVRSNMNFGQSQQGHINDAAIWDALELAQAKDFIEGNEKG
LDATVSQGGNNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRQLRYDLSQKTKEMTKIIVAQRISTIMDADLIL
VLDEGKVVGQGTHKELLAENSVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1121548 EL133_RS09595 WP_006739455.1 1869067..1870869(-) (rcrP) [Streptococcus urinalis strain NCTC13766]
ATGTTTAAGATTATTAAACGTTTAAATGCCAAAGAGTGGGGTATGATTGCACTTAGTACGCTTTTTATCTGCTTGGCGGT
TTGGGCTGATTTAAAATCGCCTTCTTATATGTCAAAAATTACCACACTTTTACAAACCAAAGGTACAACTGCTGCTGATA
TTATGGATCCAGGCTCAAAAATGCTATTATTTTCATTTGGTTCTTTTATGTCTGCGGTTATTGTTGGTTTTCTAGCTTCT
CGTACAGCAGCTAGTTTTACTACACGTTTACGTTCTGATGTTTTCAATCAAGTCATTGATTTTTCAGATGCTGAAATTAA
ACAATTTTCTGTGCCTTCACTCTTGACAAGAACAACTAATGACTTGACGCAATTGCAGATAATGATTGTCATGGGGATGC
AGGTTGTCACTCGTGGTCCCATTATGGCAGCATGGGCTTTAACAAAGATTTGGGGTAAAAGTGACCATTGGACAATGGCA
GTAGGTGTTGCTGTCGTAATTGTCATGATTTTGTTGCTATTTATTCTAAGTGTAGCCTTTCCTAGGATGCGTAAAATTCA
AGGTTTAACCGATAACCTCAATGGAACAACACGTGAAATTCTTAGTGGGATTCGTGTAGTTCGCGCTTATAATGCTGAGG
ATTATCAGGATGCCAAATTTAACAAAGAAAATATTGCTTTAACGAACCTCAACTTATTTGTCAATCGTATTATGGCATTA
ATGAATCCTGTCATGACAGTGGTTTCAAGTGGTTTAACACTTGTTATTTATTGGATTGGTGTTCATTTAATTGATGATGT
GACAATTTCAAAAACAAGCATGGCCTTAGCTATGTCTAATGTAAAAGAACGTGTTTCAATCTTTAGTGATATGGTTGTAT
TCTCATCTTATGCAATGCAGGTTATCATGGGCTTCATGATGATGGTGGCCATATTCATTATCTTACCACGTGCGATGGTT
TCTGCTGGCCGTATCAATGAAGTGCTAGCACTAAAACCTTCTGTCAACTTTTCAGAAGAAAAAGCTCATGAGAGTGTAGA
AAAAGGTTCTATTTCATTCCAAGACGTTTCATTCCGTTATGTTAAAGAATCGAAAGATGTCATAGAACATGTTTCTTTTG
AGGCTAAGGCTGGTCAGACTGTCGCATTTATTGGCTCAACTGGTTCTGGTAAATCAACACTTGTAAACTTGATACCACGC
CTTTATGATGTTACTCAGGGTGCCATTTTAGTTGATGGTATTAATATCAAAGACTATTCACATCAAGAATTGAACAATAA
AGTCGGATATATTCCACAAAAAGCAGTGCTCTTTAGTGGTACAGTCCGTTCTAATATGAATTTTGGTCAAAGTCAACAAG
GTCACATAAATGATGCTGCTATTTGGGATGCTCTAGAATTAGCTCAAGCTAAAGACTTTATTGAAGGGAATGAAAAAGGT
CTGGATGCTACAGTTTCTCAAGGTGGGAACAACTTTTCTGGAGGTCAAAAGCAACGTTTAGCAATTGCTCGAGCTTTAGC
ACGTAAACCAGAAATCCTTATTTTTGATGATTCATTTTCAGCCTTAGACTATAAAACGGATCGTCAACTACGTTATGATT
TGAGTCAAAAAACGAAAGAAATGACTAAGATTATTGTGGCACAACGCATTTCAACTATTATGGATGCCGATTTAATTTTG
GTTTTAGATGAAGGTAAAGTTGTGGGTCAAGGAACTCATAAAGAATTGTTAGCAGAAAATTCTGTTTATCAAGAAATCGC
TTATTCACAACTTTCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KE76

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

77.333

100

0.773

Multiple sequence alignment