Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL133_RS00400 | Genome accession | NZ_LR134323 |
| Coordinates | 79580..82021 (+) | Length | 813 a.a. |
| NCBI ID | WP_006740029.1 | Uniprot ID | G5KGU4 |
| Organism | Streptococcus urinalis strain NCTC13766 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 74580..87021
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL133_RS11770 | - | 75721..75909 (+) | 189 | WP_406874634.1 | SH3 domain-containing protein | - |
| EL133_RS00375 (NCTC13766_00075) | - | 76140..76319 (-) | 180 | WP_006739661.1 | hypothetical protein | - |
| EL133_RS00380 (NCTC13766_00076) | - | 76963..78105 (-) | 1143 | WP_006739306.1 | glycerate kinase | - |
| EL133_RS00385 (NCTC13766_00077) | - | 78151..78429 (-) | 279 | WP_006738397.1 | GNAT family N-acetyltransferase | - |
| EL133_RS00390 (NCTC13766_00078) | - | 78446..78913 (-) | 468 | WP_006739324.1 | small multi-drug export protein | - |
| EL133_RS00395 (NCTC13766_00079) | - | 79119..79583 (+) | 465 | WP_006739555.1 | CtsR family transcriptional regulator | - |
| EL133_RS00400 (NCTC13766_00080) | clpC | 79580..82021 (+) | 2442 | WP_006740029.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL133_RS00405 (NCTC13766_00081) | groES | 82148..82435 (+) | 288 | WP_006739058.1 | co-chaperone GroES | - |
| EL133_RS00410 (NCTC13766_00082) | groL | 82476..84104 (+) | 1629 | WP_006738714.1 | chaperonin GroEL | - |
| EL133_RS00415 (NCTC13766_00083) | - | 84449..86083 (+) | 1635 | WP_006740628.1 | zinc ribbon domain-containing protein | - |
| EL133_RS00420 (NCTC13766_00084) | - | 86114..86983 (-) | 870 | WP_006739688.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90426.70 Da Isoelectric Point: 6.2375
>NTDB_id=1121504 EL133_RS00400 WP_006740029.1 79580..82021(+) (clpC) [Streptococcus urinalis strain NCTC13766]
MSDYSYKMQEIFKRAQFQAARYRSLYLETWHILLAMVAAEDSLAGLVFSEFDSKFSPEEYEAAAILALGKVPQEVGSDIQ
LVPQSRALTEILRFSDAIRQITGSNAIGSEHVLFSMLFTPDLLATRLLEIVGFRVKDDGNNEPRLIDLRRVVEKHAGFTK
EHLKAIHELRKPKKNKTAGSFSDMMKPPITAGDLSDFTRDLTEMARQGRLEPVIGRDKEVSRMVQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIATGAIPYELQDMKVLELDMMSVVAGTRFRGDFEERMNQIIDDIESDGNIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMIGATTQEEYQKHIEKDAALSRRFAKVLIEEPSLDDAYQILLGLKSSYEDYHHVTISD
DAVLTAVKAAKRYLTSKNLPDSAIDLLDEASATVQGLVKKSQEPLLSPIDEAILSGDYKKVAKLIKSTNEKKEKTHTPVT
SEDIMVTLSKLSGIPLEKLTKADSRKYLQLEKELHKRVIGQDDAVSAISKAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNNPYSVLLFDEVEKAHPDIFNVLLQ
VLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAIRDDKTVGFGAKDISFDHSAMEKRIMEELKKAYRPEFINRIDEKIVFH
NLSETDIKDIVKIMVQPLISNLAEKGIRLKFQPSALKHLAQDGYDVEMGARPLRRTIQTQVEDTLSELILSQEIKAGDSL
TIGVSKGKLKFTY
MSDYSYKMQEIFKRAQFQAARYRSLYLETWHILLAMVAAEDSLAGLVFSEFDSKFSPEEYEAAAILALGKVPQEVGSDIQ
LVPQSRALTEILRFSDAIRQITGSNAIGSEHVLFSMLFTPDLLATRLLEIVGFRVKDDGNNEPRLIDLRRVVEKHAGFTK
EHLKAIHELRKPKKNKTAGSFSDMMKPPITAGDLSDFTRDLTEMARQGRLEPVIGRDKEVSRMVQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIATGAIPYELQDMKVLELDMMSVVAGTRFRGDFEERMNQIIDDIESDGNIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMIGATTQEEYQKHIEKDAALSRRFAKVLIEEPSLDDAYQILLGLKSSYEDYHHVTISD
DAVLTAVKAAKRYLTSKNLPDSAIDLLDEASATVQGLVKKSQEPLLSPIDEAILSGDYKKVAKLIKSTNEKKEKTHTPVT
SEDIMVTLSKLSGIPLEKLTKADSRKYLQLEKELHKRVIGQDDAVSAISKAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNNPYSVLLFDEVEKAHPDIFNVLLQ
VLDDGVLTDSRGRKVDFSNTIIIMTSNLGATAIRDDKTVGFGAKDISFDHSAMEKRIMEELKKAYRPEFINRIDEKIVFH
NLSETDIKDIVKIMVQPLISNLAEKGIRLKFQPSALKHLAQDGYDVEMGARPLRRTIQTQVEDTLSELILSQEIKAGDSL
TIGVSKGKLKFTY
Nucleotide
Download Length: 2442 bp
>NTDB_id=1121504 EL133_RS00400 WP_006740029.1 79580..82021(+) (clpC) [Streptococcus urinalis strain NCTC13766]
ATGAGTGATTATTCATACAAAATGCAAGAAATATTTAAACGAGCACAATTTCAAGCAGCTCGTTATAGAAGTTTATACCT
TGAAACTTGGCATATATTATTAGCTATGGTAGCCGCAGAAGATTCTTTAGCAGGTCTTGTTTTTTCAGAATTTGATTCAA
AATTTTCACCAGAAGAATATGAAGCGGCAGCAATTTTAGCTTTAGGTAAAGTGCCACAAGAAGTTGGTTCAGATATTCAA
TTAGTTCCCCAATCTAGAGCTTTAACTGAAATCTTGCGTTTCTCAGATGCTATTAGACAAATTACTGGTTCCAATGCAAT
TGGTTCAGAACATGTTTTATTTTCAATGCTTTTTACTCCAGATTTGTTAGCAACGAGATTGTTAGAAATCGTTGGCTTTA
GAGTAAAAGATGATGGAAATAATGAGCCTCGTCTTATTGATTTACGTCGGGTTGTTGAAAAGCATGCTGGTTTTACAAAG
GAACATTTAAAAGCTATCCATGAATTACGTAAACCGAAGAAAAATAAAACTGCAGGTTCATTTTCTGACATGATGAAACC
CCCTATAACAGCAGGAGACTTATCAGATTTCACTAGAGACTTAACTGAAATGGCAAGACAGGGACGTTTAGAGCCAGTTA
TTGGTCGTGATAAAGAAGTGTCTCGTATGGTTCAAGTTTTAAGCCGAAAAACAAAAAACAACCCTGTTTTAGTTGGTGAT
GCTGGGGTTGGTAAAACTGCTCTAGCTTATGGTTTAGCACAGCGTATTGCAACTGGAGCTATTCCTTACGAACTTCAAGA
TATGAAAGTGTTAGAGCTTGATATGATGAGTGTTGTTGCAGGAACGAGGTTCAGAGGTGATTTTGAAGAACGAATGAATC
AGATTATTGATGACATTGAATCTGACGGCAACATTATTCTCTTTGTTGATGAGTTACACACCATAATGGGTTCAGGGAGT
GGTATTGATAGTACTTTAGATGCCGCAAATATTCTAAAGCCAGCTCTCTCTAGAGGAACACTTCATATGATAGGTGCAAC
AACACAAGAGGAGTATCAAAAACATATTGAAAAAGATGCGGCATTATCTCGTCGTTTTGCAAAAGTTTTAATTGAAGAGC
CAAGTCTTGATGATGCTTATCAAATTTTATTGGGTCTCAAATCATCTTACGAAGATTATCATCATGTAACCATATCAGAT
GATGCTGTATTGACAGCAGTTAAAGCAGCAAAACGGTATTTAACCAGTAAAAACTTACCGGATTCAGCAATTGATTTATT
AGATGAAGCGAGTGCGACTGTCCAAGGTCTTGTTAAAAAATCTCAAGAACCTTTGTTAAGTCCAATTGATGAAGCAATCC
TTTCTGGTGACTATAAGAAAGTTGCAAAGCTTATTAAATCAACAAATGAGAAAAAAGAAAAGACACATACTCCAGTGACG
TCTGAGGATATTATGGTAACGCTAAGTAAGCTTTCTGGCATTCCTCTTGAAAAATTAACAAAAGCAGATAGTCGTAAATA
TTTACAACTTGAAAAAGAACTCCATAAACGAGTTATTGGTCAAGATGATGCTGTTTCAGCAATTTCTAAAGCAATCCGAC
GTAATCAATCTGGTATTCGCACTGGAAAACGCCCAATTGGTTCTTTTATGTTTTTAGGTCCAACAGGTGTTGGTAAGACA
GAATTGGCCAAGGCATTGGCAGAAGTGCTATTTGATGATGAATCAGCTTTGATTCGTTTTGATATGTCTGAATATATGGA
AAAATTTGCCGCCAGTCGATTAAATGGAGCACCTCCAGGCTATGTTGGCTATGATGAAGGCGGTGAATTGACAGAAAAAG
TAAGAAATAATCCTTATTCAGTCTTACTCTTTGATGAAGTTGAAAAAGCACATCCGGATATTTTTAATGTCCTTCTACAA
GTTCTTGATGACGGTGTCTTAACAGACAGTAGAGGTCGTAAAGTTGACTTTTCAAATACCATCATTATCATGACAAGTAA
TCTTGGGGCAACAGCAATTCGAGATGATAAAACAGTTGGCTTCGGTGCGAAAGATATTTCATTTGATCATTCGGCGATGG
AAAAACGGATTATGGAAGAACTTAAAAAAGCCTATCGACCAGAATTTATCAATCGTATTGATGAAAAGATTGTATTTCAT
AACTTATCTGAAACAGATATTAAAGATATTGTTAAAATCATGGTTCAACCCCTTATTAGTAATCTAGCAGAAAAAGGTAT
TAGGCTAAAATTTCAACCTTCTGCTCTAAAACATCTGGCTCAAGATGGTTATGATGTTGAAATGGGTGCTCGACCACTGA
GAAGGACAATCCAAACACAAGTAGAAGATACGTTATCAGAATTGATTCTTTCACAAGAAATAAAAGCTGGAGATAGCTTA
ACAATTGGTGTTTCAAAAGGAAAATTAAAATTTACATATTGA
ATGAGTGATTATTCATACAAAATGCAAGAAATATTTAAACGAGCACAATTTCAAGCAGCTCGTTATAGAAGTTTATACCT
TGAAACTTGGCATATATTATTAGCTATGGTAGCCGCAGAAGATTCTTTAGCAGGTCTTGTTTTTTCAGAATTTGATTCAA
AATTTTCACCAGAAGAATATGAAGCGGCAGCAATTTTAGCTTTAGGTAAAGTGCCACAAGAAGTTGGTTCAGATATTCAA
TTAGTTCCCCAATCTAGAGCTTTAACTGAAATCTTGCGTTTCTCAGATGCTATTAGACAAATTACTGGTTCCAATGCAAT
TGGTTCAGAACATGTTTTATTTTCAATGCTTTTTACTCCAGATTTGTTAGCAACGAGATTGTTAGAAATCGTTGGCTTTA
GAGTAAAAGATGATGGAAATAATGAGCCTCGTCTTATTGATTTACGTCGGGTTGTTGAAAAGCATGCTGGTTTTACAAAG
GAACATTTAAAAGCTATCCATGAATTACGTAAACCGAAGAAAAATAAAACTGCAGGTTCATTTTCTGACATGATGAAACC
CCCTATAACAGCAGGAGACTTATCAGATTTCACTAGAGACTTAACTGAAATGGCAAGACAGGGACGTTTAGAGCCAGTTA
TTGGTCGTGATAAAGAAGTGTCTCGTATGGTTCAAGTTTTAAGCCGAAAAACAAAAAACAACCCTGTTTTAGTTGGTGAT
GCTGGGGTTGGTAAAACTGCTCTAGCTTATGGTTTAGCACAGCGTATTGCAACTGGAGCTATTCCTTACGAACTTCAAGA
TATGAAAGTGTTAGAGCTTGATATGATGAGTGTTGTTGCAGGAACGAGGTTCAGAGGTGATTTTGAAGAACGAATGAATC
AGATTATTGATGACATTGAATCTGACGGCAACATTATTCTCTTTGTTGATGAGTTACACACCATAATGGGTTCAGGGAGT
GGTATTGATAGTACTTTAGATGCCGCAAATATTCTAAAGCCAGCTCTCTCTAGAGGAACACTTCATATGATAGGTGCAAC
AACACAAGAGGAGTATCAAAAACATATTGAAAAAGATGCGGCATTATCTCGTCGTTTTGCAAAAGTTTTAATTGAAGAGC
CAAGTCTTGATGATGCTTATCAAATTTTATTGGGTCTCAAATCATCTTACGAAGATTATCATCATGTAACCATATCAGAT
GATGCTGTATTGACAGCAGTTAAAGCAGCAAAACGGTATTTAACCAGTAAAAACTTACCGGATTCAGCAATTGATTTATT
AGATGAAGCGAGTGCGACTGTCCAAGGTCTTGTTAAAAAATCTCAAGAACCTTTGTTAAGTCCAATTGATGAAGCAATCC
TTTCTGGTGACTATAAGAAAGTTGCAAAGCTTATTAAATCAACAAATGAGAAAAAAGAAAAGACACATACTCCAGTGACG
TCTGAGGATATTATGGTAACGCTAAGTAAGCTTTCTGGCATTCCTCTTGAAAAATTAACAAAAGCAGATAGTCGTAAATA
TTTACAACTTGAAAAAGAACTCCATAAACGAGTTATTGGTCAAGATGATGCTGTTTCAGCAATTTCTAAAGCAATCCGAC
GTAATCAATCTGGTATTCGCACTGGAAAACGCCCAATTGGTTCTTTTATGTTTTTAGGTCCAACAGGTGTTGGTAAGACA
GAATTGGCCAAGGCATTGGCAGAAGTGCTATTTGATGATGAATCAGCTTTGATTCGTTTTGATATGTCTGAATATATGGA
AAAATTTGCCGCCAGTCGATTAAATGGAGCACCTCCAGGCTATGTTGGCTATGATGAAGGCGGTGAATTGACAGAAAAAG
TAAGAAATAATCCTTATTCAGTCTTACTCTTTGATGAAGTTGAAAAAGCACATCCGGATATTTTTAATGTCCTTCTACAA
GTTCTTGATGACGGTGTCTTAACAGACAGTAGAGGTCGTAAAGTTGACTTTTCAAATACCATCATTATCATGACAAGTAA
TCTTGGGGCAACAGCAATTCGAGATGATAAAACAGTTGGCTTCGGTGCGAAAGATATTTCATTTGATCATTCGGCGATGG
AAAAACGGATTATGGAAGAACTTAAAAAAGCCTATCGACCAGAATTTATCAATCGTATTGATGAAAAGATTGTATTTCAT
AACTTATCTGAAACAGATATTAAAGATATTGTTAAAATCATGGTTCAACCCCTTATTAGTAATCTAGCAGAAAAAGGTAT
TAGGCTAAAATTTCAACCTTCTGCTCTAAAACATCTGGCTCAAGATGGTTATGATGTTGAAATGGGTGCTCGACCACTGA
GAAGGACAATCCAAACACAAGTAGAAGATACGTTATCAGAATTGATTCTTTCACAAGAAATAAAAGCTGGAGATAGCTTA
ACAATTGGTGTTTCAAAAGGAAAATTAAAATTTACATATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
74.969 |
99.754 |
0.748 |
| clpC | Streptococcus thermophilus LMD-9 |
71.779 |
100 |
0.72 |
| clpC | Streptococcus thermophilus LMG 18311 |
71.779 |
100 |
0.72 |
| clpC | Streptococcus pneumoniae Rx1 |
65.233 |
100 |
0.653 |
| clpC | Streptococcus pneumoniae D39 |
65.233 |
100 |
0.653 |
| clpC | Streptococcus pneumoniae TIGR4 |
65.111 |
100 |
0.652 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.492 |
100 |
0.494 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.284 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
46.958 |
78.844 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
46.345 |
79.09 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
46.345 |
79.09 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
46.345 |
79.09 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.807 |
79.213 |
0.363 |