Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL130_RS08890 Genome accession   NZ_LR134320
Coordinates   1777613..1778416 (-) Length   267 a.a.
NCBI ID   WP_002271902.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10832     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1772613..1783416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS08880 (NCTC10832_01739) smc 1773275..1776811 (-) 3537 WP_126475542.1 chromosome segregation protein SMC -
  EL130_RS08885 (NCTC10832_01740) rnc 1776811..1777506 (-) 696 WP_002262927.1 ribonuclease III -
  EL130_RS08890 (NCTC10832_01741) vicX 1777613..1778416 (-) 804 WP_002271902.1 MBL fold metallo-hydrolase Regulator
  EL130_RS08895 (NCTC10832_01742) vicK 1778413..1779765 (-) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL130_RS08900 (NCTC10832_01743) vicR 1779758..1780465 (-) 708 WP_002262930.1 response regulator YycF Regulator
  EL130_RS08905 (NCTC10832_01744) - 1780818..1781600 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  EL130_RS08910 (NCTC10832_01745) - 1781597..1782409 (+) 813 WP_002277521.1 transporter substrate-binding domain-containing protein -
  EL130_RS08915 (NCTC10832_01746) - 1782427..1783131 (+) 705 WP_002262933.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29723.79 Da        Isoelectric Point: 6.1184

>NTDB_id=1121442 EL130_RS08890 WP_002271902.1 1777613..1778416(-) (vicX) [Streptococcus mutans strain NCTC10832]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDSMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1121442 EL130_RS08890 WP_002271902.1 1777613..1778416(-) (vicX) [Streptococcus mutans strain NCTC10832]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCGGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATAGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.625

100

0.996

Multiple sequence alignment