Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   EL130_RS04390 Genome accession   NZ_LR134320
Coordinates   853212..854252 (+) Length   346 a.a.
NCBI ID   WP_002296118.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10832     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 848212..859252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS04365 (NCTC10832_00831) - 848333..848971 (-) 639 WP_002283401.1 hypothetical protein -
  EL130_RS04370 (NCTC10832_00832) - 849170..849736 (+) 567 WP_002268842.1 TetR/AcrR family transcriptional regulator -
  EL130_RS04375 (NCTC10832_00833) - 849857..851632 (+) 1776 WP_126475447.1 oleate hydratase -
  EL130_RS04380 (NCTC10832_00834) rsmD 852205..852744 (+) 540 WP_002264418.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL130_RS04385 (NCTC10832_00835) coaD 852734..853234 (+) 501 WP_002264419.1 pantetheine-phosphate adenylyltransferase -
  EL130_RS04390 (NCTC10832_00836) sepM 853212..854252 (+) 1041 WP_002296118.1 S16 family serine protease SepM Regulator
  EL130_RS04395 (NCTC10832_00837) - 854325..855656 (+) 1332 WP_002264422.1 bifunctional metallophosphatase/5'-nucleotidase -
  EL130_RS04400 (NCTC10832_00838) - 855653..856201 (+) 549 WP_002264423.1 YutD family protein -
  EL130_RS04405 (NCTC10832_00839) rlmN 856198..857283 (+) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EL130_RS04410 (NCTC10832_00840) - 857283..857819 (+) 537 WP_002262043.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37951.92 Da        Isoelectric Point: 10.2075

>NTDB_id=1121424 EL130_RS04390 WP_002296118.1 853212..854252(+) (sepM) [Streptococcus mutans strain NCTC10832]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSNDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1121424 EL130_RS04390 WP_002296118.1 853212..854252(+) (sepM) [Streptococcus mutans strain NCTC10832]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGCTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTAATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAACAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.422

100

0.994

Multiple sequence alignment