Detailed information NTG1121309

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EL136_RS10830
• Genome accession: NZ_LR134317
• Coordinates: 2269156..2270079 (+)
• Length: 307 a.a.
• NCBI ID: WP_154804371.1
• Uniprot ID: A0A7Z8ZX89
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC6180
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2264156..2275079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL136_RS10815 (NCTC6180_02215)	amiC	2265659..2267158 (+)	1500	WP_154804370.1	ABC transporter permease	Regulator
EL136_RS10820 (NCTC6180_02216)	amiD	2267158..2268084 (+)	927	WP_042671297.1	oligopeptide ABC transporter permease OppC	Regulator
EL136_RS10825 (NCTC6180_02217)	amiE	2268093..2269163 (+)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
EL136_RS10830 (NCTC6180_02218)	amiF	2269156..2270079 (+)	924	WP_154804371.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34709.88 Da
• Isoelectric Point: 6.5989

>NTDB_id=1121309 EL136_RS10830 WP_154804371.1 2269156..2270079(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNETSSGEIHYDGKIINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEDERKEKIKQMMSEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKIQAEKDLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERQKKLVVYHPEQHDYSVDKPSMVEIKPNHFVWANQAEAERYRKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1121309 EL136_RS10830 WP_154804371.1 2269156..2270079(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGTCTGAAAAATTAGTTGAAGTAAAAGACCTGGAGATTTCCTTTGGAGAGGGAAAGAAAAAGTTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAATAAAGGAGAAACCTTTTCTCTTGTTGGAGAATCAGGCAGCGGAAAGACAACAATAGGTCGTG
CTATCATTGGCTTAAATGAAACAAGCTCAGGCGAAATCCACTATGACGGTAAGATTATTAATGGTAAAAAATCAAAATCT
GAAGCTAATGAACTGATTAGAAAAATCCAAATGATTTTTCAAGACCCAGCAGCCAGCCTGAATGAGCGTGCAACGGTTGA
TTATATCATCTCAGAAGGTCTTTATAATTTTAACCTATTCAAGACAGAAGACGAACGTAAAGAAAAAATTAAACAGATGA
TGTCAGAGGTGGGCTTGCTTGCAGAGCACCTGACACGCTACCCTCATGAGTTTTCAGGTGGGCAGCGTCAGCGTATAGGC
ATTGCAAGAGCACTTGTAATGGATCCAGAGTTTGTCATTGCTGATGAGCCAATTTCAGCTCTTGATGTATCTGTTCGTGC
TCAGGTCTTGAATCTGTTGAAGAAAATCCAGGCTGAAAAAGACTTGACCTATTTATTCATTGCTCATGATTTATCGGTTG
TGCGTTTTATTTCAGATCGTATTGCTGTTATTCACAAAGGAGTAATTGTTGAAGTCGCTGAAACAGAAGAGCTTTTTGTT
AATCCTGTTCACCCTTATACCAAATCTCTGTTGTCAGCAGTACCAATTCCAGATCCCATTTTAGAGCGTCAAAAGAAATT
GGTGGTCTATCATCCAGAGCAGCATGACTATTCTGTTGACAAGCCATCAATGGTGGAAATCAAACCAAATCACTTCGTCT
GGGCTAACCAGGCGGAAGCGGAGCGTTACCGCAAAGAGCTTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A7Z8ZX89

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.68	99.674	0.824
amiF	Streptococcus thermophilus LMD-9	82.353	99.674	0.821
amiF	Streptococcus salivarius strain HSISS4	82.353	99.674	0.821