Detailed information NTG0112117

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: VV93_RS06360
• Genome accession: NZ_CP009261
• Coordinates: 1354041..1355390 (+)
• Length: 449 a.a.
• NCBI ID: WP_039553312.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 93U204
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1349041..1360390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV93_RS06345 (VV93_v1c12350)	lrp	1349775..1350269 (+)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-
VV93_RS06350 (VV93_v1c12360)	-	1350414..1353365 (+)	2952	WP_039553310.1	DNA translocase FtsK	-
VV93_RS06355 (VV93_v1c12370)	lolA	1353438..1354034 (+)	597	WP_011080765.1	outer membrane lipoprotein chaperone LolA	-
VV93_RS06360 (VV93_v1c12380)	rarA	1354041..1355390 (+)	1350	WP_039553312.1	replication-associated recombination protein A	Machinery gene
VV93_RS06365 (VV93_v1c12390)	serS	1355482..1356789 (+)	1308	WP_011080763.1	serine--tRNA ligase	-
VV93_RS06370 (VV93_v1c12400)	bioA	1356852..1358129 (-)	1278	WP_039553314.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
VV93_RS06375 (VV93_v1c12410)	bioB	1358270..1359322 (+)	1053	WP_011080761.1	biotin synthase BioB	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49748.11 Da
• Isoelectric Point: 5.6807

>NTDB_id=112117 VV93_RS06360 WP_039553312.1 1354041..1355390(+) (rarA) [Vibrio vulnificus strain 93U204]
MSNYTLDFSGDEDFRPLAARMRPETIEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKEIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLERLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWSARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=112117 VV93_RS06360 WP_039553312.1 1354041..1355390(+) (rarA) [Vibrio vulnificus strain 93U204]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGATCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGCCCTGGTAAGCCATTACGTCGCGCGCTAGAGGCCGGCCACATTCATTCAA
TGATTTTGTGGGGACCGCCAGGTACAGGCAAGACAACATTAGCGGAAGTAGCCGCAAACTACGCCAATGCGGAAGTTGAA
CGCGTGTCTGCGGTCACGTCCGGCGTGAAAGAAATTCGTGCCGCAATTGAAAAAGCACGTGAGAACAAAATGGCGGGTCG
TCGCACCATCTTGTTTGTGGATGAGGTACATCGCTTTAATAAATCACAGCAAGATGCCTTCTTACCGCACATTGAAGATG
GAACAGTGACTTTTATCGGCGCGACCACAGAAAATCCATCGTTTGAACTGAACAACGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTGGCATTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCTGCACACTTTGCTGATAATGTTCTGGAGCGTCTGGCTGAGCTCGTCAATGGTGATGCGCGAATGTCTCTTA
ACTATCTTGAGCTGCTGTATGACATGGCAGAAGACAATGCTCAGGGTGAAAAAGAGATCACGCTAAAGCTACTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGTTTTGATAATAAAGGCGACATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGCGGCTCAAACCCGGACGCTGCGCTTTATTGGTCGGCGAGAATGATCGCTGCCGGTTGTGATCCACTCTATATCGCGC
GACGTTTGCTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGACCCGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCGCCGAAAAG
TAACGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCACATAATCTTCCTGAATTTGAAGTGCCTTTCCATTTGC
GTAATGCACCGACCGGATTGATGAAAGATCTCGGTTATGGAGAAGGTTATCGATACGCTCATGATGAACCAGGGGCCTAC
GCCGCAGGCGAACAATATTTGCCTGCTGAAATTGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (189-268)

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.426	94.209	0.381