Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL107_RS07860 Genome accession   NZ_LR134314
Coordinates   1530279..1531055 (-) Length   258 a.a.
NCBI ID   WP_002981939.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8302     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1525279..1536055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL107_RS07840 (NCTC8302_01555) ychF 1525713..1526828 (-) 1116 WP_011017220.1 redox-regulated ATPase YchF -
  EL107_RS07845 (NCTC8302_01556) - 1527158..1527355 (-) 198 WP_011184039.1 DUF951 domain-containing protein -
  EL107_RS07850 (NCTC8302_01557) dnaN 1527430..1528566 (-) 1137 WP_011184038.1 DNA polymerase III subunit beta -
  EL107_RS07855 (NCTC8302_01558) dnaA 1528721..1530076 (-) 1356 WP_002987659.1 chromosomal replication initiator protein DnaA -
  EL107_RS07860 (NCTC8302_01559) spo0J 1530279..1531055 (-) 777 WP_002981939.1 ParB/RepB/Spo0J family partition protein Regulator
  EL107_RS07865 (NCTC8302_01560) htrA 1531144..1532367 (-) 1224 WP_002991468.1 S1C family serine protease Regulator
  EL107_RS07870 (NCTC8302_01561) rlmH 1532579..1533058 (+) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL107_RS07880 (NCTC8302_01564) - 1533453..1534227 (+) 775 Protein_1457 IS30 family transposase -
  EL107_RS07885 - 1534427..1535530 (+) 1104 WP_126409772.1 IS30 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29056.87 Da        Isoelectric Point: 10.3100

>NTDB_id=1121157 EL107_RS07860 WP_002981939.1 1530279..1531055(-) (spo0J) [Streptococcus pyogenes strain NCTC8302]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKIPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1121157 EL107_RS07860 WP_002981939.1 1530279..1531055(-) (spo0J) [Streptococcus pyogenes strain NCTC8302]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAATTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACCCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.144

99.612

0.589

Multiple sequence alignment