Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL107_RS04370 Genome accession   NZ_LR134314
Coordinates   854049..854774 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NCTC8302     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 849049..859774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL107_RS04335 (NCTC8302_00868) rnpM 849078..849374 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  EL107_RS04340 (NCTC8302_00869) nusA 849390..850547 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  EL107_RS04345 (NCTC8302_00870) rimP 850722..851258 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  EL107_RS04355 (NCTC8302_00872) trmB 851522..852157 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL107_RS04360 (NCTC8302_00873) ccrZ 852157..852948 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  EL107_RS04365 (NCTC8302_00874) - 853012..854046 (-) 1035 WP_002983381.1 ABC transporter permease -
  EL107_RS04370 (NCTC8302_00875) pptA 854049..854774 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  EL107_RS04375 (NCTC8302_00876) - 854846..855265 (+) 420 WP_002983376.1 HIT family protein -
  EL107_RS04380 (NCTC8302_00877) - 855262..855618 (+) 357 WP_002988657.1 hypothetical protein -
  EL107_RS04385 (NCTC8302_00878) brpA 855729..857012 (-) 1284 WP_011184864.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL107_RS04390 (NCTC8302_00879) - 857021..857545 (-) 525 WP_011184865.1 GNAT family N-acetyltransferase -
  EL107_RS04395 (NCTC8302_00880) tsaE 857520..857981 (-) 462 WP_011184866.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL107_RS04400 (NCTC8302_00881) - 858135..859595 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=1121130 EL107_RS04370 WP_002983379.1 854049..854774(-) (pptA) [Streptococcus pyogenes strain NCTC8302]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1121130 EL107_RS04370 WP_002983379.1 854049..854774(-) (pptA) [Streptococcus pyogenes strain NCTC8302]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment