Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL115_RS01670 Genome accession   NZ_LR134307
Coordinates   314185..314916 (+) Length   243 a.a.
NCBI ID   WP_126441165.1    Uniprot ID   -
Organism   Streptococcus milleri strain NCTC10708     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 309185..319916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL115_RS01640 (NCTC10708_00331) - 309519..310958 (+) 1440 WP_003070376.1 NCS2 family permease -
  EL115_RS01645 (NCTC10708_00332) tsaE 311296..311736 (+) 441 WP_003070375.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL115_RS01650 (NCTC10708_00333) - 311729..312250 (+) 522 WP_126441162.1 GNAT family N-acetyltransferase -
  EL115_RS01655 (NCTC10708_00334) brpA 312258..313364 (+) 1107 WP_126441163.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL115_RS01660 (NCTC10708_00335) - 313408..313695 (-) 288 WP_126441164.1 hypothetical protein -
  EL115_RS01665 (NCTC10708_00336) - 313705..314115 (-) 411 WP_003070368.1 HIT family protein -
  EL115_RS01670 (NCTC10708_00337) pptA 314185..314916 (+) 732 WP_126441165.1 ABC transporter ATP-binding protein Regulator
  EL115_RS01675 (NCTC10708_00338) - 314913..315959 (+) 1047 WP_126441166.1 ABC transporter permease -
  EL115_RS01680 (NCTC10708_00339) ccrZ 316010..316807 (+) 798 WP_006269344.1 cell cycle regulator CcrZ -
  EL115_RS01685 (NCTC10708_00340) trmB 316804..317439 (+) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL115_RS01690 (NCTC10708_00341) - 317845..318537 (+) 693 WP_126441167.1 VIT1/CCC1 transporter family protein -
  EL115_RS01695 (NCTC10708_00342) rimP 318749..319237 (+) 489 WP_020999039.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26964.40 Da        Isoelectric Point: 4.5809

>NTDB_id=1120868 EL115_RS01670 WP_126441165.1 314185..314916(+) (pptA) [Streptococcus milleri strain NCTC10708]
MLEIKGLTGGYINIPVLKDVSFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLQEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKTKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1120868 EL115_RS01670 WP_126441165.1 314185..314916(+) (pptA) [Streptococcus milleri strain NCTC10708]
ATGTTAGAAATAAAAGGGCTTACAGGCGGATATATAAATATCCCTGTTTTAAAAGATGTTAGTTTTACAGTAGGAAATGG
CGAACTAGTAGGGTTGATTGGCTTGAATGGTGCGGGTAAATCTACAACAATCAATGAAATTATTGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGACAATCCCATGGCTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAACAATTATTGACCAAGTTTCGCTTGCAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTGGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGACAAAAGGCAAGTCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACAGAAGAG
GCAAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.548

98.354

0.704
  pptA Streptococcus salivarius strain HSISS4

71.13

98.354

0.7

Multiple sequence alignment