Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EL116_RS13245 Genome accession   NZ_LR134304
Coordinates   2679895..2680560 (-) Length   221 a.a.
NCBI ID   WP_047530898.1    Uniprot ID   A0A2K4AHE3
Organism   Staphylococcus schweitzeri strain NCTC13712     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2674895..2685560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL116_RS13230 (NCTC13712_02576) - 2676132..2678138 (-) 2007 WP_047548163.1 ABC transporter permease -
  EL116_RS13235 (NCTC13712_02577) - 2678135..2678890 (-) 756 WP_047548166.1 ABC transporter ATP-binding protein -
  EL116_RS13240 (NCTC13712_02578) braS 2678997..2679884 (-) 888 WP_047548168.1 sensor histidine kinase Regulator
  EL116_RS13245 (NCTC13712_02579) braR 2679895..2680560 (-) 666 WP_047530898.1 response regulator transcription factor Regulator
  EL116_RS13250 (NCTC13712_02580) - 2680595..2680786 (-) 192 WP_047426825.1 hypothetical protein -
  EL116_RS13255 (NCTC13712_02581) - 2680983..2682407 (+) 1425 WP_047548171.1 alkaline phosphatase -
  EL116_RS14005 (NCTC13712_02582) - 2682464..2682565 (-) 102 WP_000731976.1 SE2200 family small protein -
  EL116_RS13265 (NCTC13712_02583) - 2682688..2683143 (-) 456 WP_047426832.1 MarR family winged helix-turn-helix transcriptional regulator -
  EL116_RS13270 (NCTC13712_02584) - 2683390..2684151 (-) 762 WP_047548173.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25230.24 Da        Isoelectric Point: 4.7772

>NTDB_id=1120799 EL116_RS13245 WP_047530898.1 2679895..2680560(-) (braR) [Staphylococcus schweitzeri strain NCTC13712]
MKILIVEDDFVIAESLASELKKWNYDVVLAEQFDNITAIFNNQQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIMFVSSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVVNDTLTVKGCTLILDEAKVAYQGESIQLSLTELQILK
LLFQNADKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLSTVGINDFITTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1120799 EL116_RS13245 WP_047530898.1 2679895..2680560(-) (braR) [Staphylococcus schweitzeri strain NCTC13712]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCGGAAAGTTTAGCATCTGAATTAAAAAAATGGAATTATGATGT
GGTTTTGGCAGAACAATTTGATAATATAACAGCCATTTTTAACAATCAGCAACCACAGCTTGTGCTGTTAGATATCAATT
TACCCACTTTAAATGGTTTTCATTGGTGCCAAGAAATTCGCAAAACATCAAATGTACCTATCATGTTTGTTAGTTCGCGT
ATAGATAACATGGATCAAATTATGGCTATACAAATGGGTGGCGATGATTTTATTGAAAAACCATTCAATTTGTCATTAAC
TATTGCTAAAATTCAAGCACTTTTAAGACGTACTTATGACTTAACAGTTGTCAATGATACCTTGACAGTCAAAGGGTGTA
CGCTAATATTAGATGAAGCTAAGGTCGCTTATCAAGGGGAGAGTATACAGTTATCTTTGACAGAATTACAAATTCTAAAA
TTATTGTTCCAAAACGCAGACAAGTATGTGAGTCGAACAGCTTTAATTGAAAAATGCTGGGAGTCTGAAAACTTCATAGA
TGATAATACATTAGCAGTAAATATGACACGTCTACGTAAAAAATTAAGTACTGTAGGTATCAATGATTTTATTACTACCA
AGAAAAATGTTGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K4AHE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

89.593

100

0.896

Multiple sequence alignment