Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL096_RS08690 Genome accession   NZ_LR134294
Coordinates   1622151..1622909 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain NCTC12977     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1617151..1627909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL096_RS08660 (NCTC12977_01686) comE 1617748..1618500 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  EL096_RS08665 (NCTC12977_01687) comD/comD1 1618497..1619822 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  EL096_RS08670 (NCTC12977_01688) comC/comC1 1619843..1619968 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  EL096_RS08680 (NCTC12977_01690) rlmH 1620250..1620729 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL096_RS08685 (NCTC12977_01691) htrA 1620912..1622093 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  EL096_RS08690 (NCTC12977_01692) spo0J 1622151..1622909 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  EL096_RS08695 (NCTC12977_01693) dnaA 1623122..1624483 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  EL096_RS08700 (NCTC12977_01694) dnaN 1624642..1625778 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  EL096_RS08705 (NCTC12977_01695) - 1625843..1626037 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  EL096_RS08710 (NCTC12977_01696) ychF 1626121..1627236 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  EL096_RS08715 (NCTC12977_01697) pth 1627307..1627876 (+) 570 WP_000163931.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=1120587 EL096_RS08690 WP_000410378.1 1622151..1622909(+) (spo0J) [Streptococcus pneumoniae strain NCTC12977]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1120587 EL096_RS08690 WP_000410378.1 1622151..1622909(+) (spo0J) [Streptococcus pneumoniae strain NCTC12977]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment