Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL096_RS07075 Genome accession   NZ_LR134294
Coordinates   1324530..1325567 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain NCTC12977     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1319530..1330567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL096_RS07050 (NCTC12977_01375) - 1320269..1321600 (-) 1332 WP_000390039.1 hemolysin family protein -
  EL096_RS07055 (NCTC12977_01376) endA 1321891..1322715 (-) 825 WP_001036791.1 DNA-entry nuclease EndA Machinery gene
  EL096_RS07060 (NCTC12977_01377) - 1322754..1322942 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  EL096_RS07065 (NCTC12977_01378) murA 1322935..1324218 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EL096_RS07070 (NCTC12977_01379) - 1324242..1324472 (-) 231 WP_000250393.1 DUF1146 family protein -
  EL096_RS07075 (NCTC12977_01380) sepM 1324530..1325567 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EL096_RS07080 (NCTC12977_01381) coaD 1325551..1326039 (-) 489 WP_050221168.1 pantetheine-phosphate adenylyltransferase -
  EL096_RS07085 (NCTC12977_01382) rsmD 1326029..1326568 (-) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL096_RS07090 (NCTC12977_01383) asnA 1326633..1327625 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EL096_RS07100 (NCTC12977_01384) - 1327737..1328420 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  EL096_RS07105 (NCTC12977_01385) - 1328476..1329216 (-) 741 WP_000152692.1 TrmH family RNA methyltransferase -
  EL096_RS07110 (NCTC12977_01386) - 1329250..1329528 (+) 279 WP_001174613.1 acylphosphatase -
  EL096_RS07115 (NCTC12977_01387) yidC 1329606..1330532 (+) 927 WP_000835949.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=1120563 EL096_RS07075 WP_000727277.1 1324530..1325567(-) (sepM) [Streptococcus pneumoniae strain NCTC12977]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1120563 EL096_RS07075 WP_000727277.1 1324530..1325567(-) (sepM) [Streptococcus pneumoniae strain NCTC12977]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAATTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment