Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   EL097_RS06615 Genome accession   NZ_LR134293
Coordinates   1288469..1290271 (+) Length   600 a.a.
NCBI ID   WP_003044166.1    Uniprot ID   A0AAV3FSZ1
Organism   Streptococcus canis strain NCTC12191     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1283469..1295271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL097_RS06595 (NCTC12191_01297) nagB 1284585..1285289 (+) 705 WP_003044177.1 glucosamine-6-phosphate deaminase -
  EL097_RS06600 (NCTC12191_01298) - 1285407..1286123 (+) 717 WP_003044174.1 pseudouridine synthase -
  EL097_RS06605 (NCTC12191_01299) - 1286214..1287377 (+) 1164 WP_003044171.1 MFS transporter -
  EL097_RS06610 (NCTC12191_01300) - 1287494..1288456 (+) 963 WP_003044168.1 competence protein CoiA -
  EL097_RS06615 (NCTC12191_01301) pepF 1288469..1290271 (+) 1803 WP_003044166.1 oligoendopeptidase F Regulator
  EL097_RS06620 (NCTC12191_01302) - 1290460..1290900 (+) 441 WP_003044162.1 NADPH-dependent FMN reductase -
  EL097_RS06625 (NCTC12191_01303) - 1291123..1291665 (+) 543 WP_003044160.1 GNAT family N-acetyltransferase -
  EL097_RS06630 (NCTC12191_01304) - 1291665..1292324 (+) 660 WP_003044158.1 HAD-IA family hydrolase -
  EL097_RS06635 - 1292342..1292416 (+) 75 Protein_1226 HAD family phosphatase -
  EL097_RS06640 (NCTC12191_01305) - 1292523..1293731 (+) 1209 WP_003044153.1 OFA family MFS transporter -
  EL097_RS06645 (NCTC12191_01306) - 1293786..1294493 (+) 708 WP_003044150.1 O-methyltransferase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69298.27 Da        Isoelectric Point: 4.7742

>NTDB_id=1120515 EL097_RS06615 WP_003044166.1 1288469..1290271(+) (pepF) [Streptococcus canis strain NCTC12191]
MTDNRSHLEKKYTWDLSTIFATDEMWEAEVSQLTTDVEASKEFAGHLLDSSANLLKITKTYLELARRVEKVYVYAHMKND
QDTTVAKYQEYQAKASGLYAKFSEVFSFYDPEVMTLSQEDYQTFLTETPELKGYNHFFDKLFQAREHVLSQAEEELLAGA
QEIFNGAEETFSILDNADIVFPTVKNDKGEDVELTHGNFISLMESKDRSVRQAAYEAMYSTYEQFQHTYAKTLQTNVKVQ
NYKARVHKYNSARQAAMAANFIPEAVYDTLLETVNKHLPLLHHYLKLRQEVLGLDELKMYDVYTPLSETDLAIGYDEALE
KAEKVLAVFGKDYADRVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTRET
QPYVYGDYSIFLAEIASTTNENIMTEALLNEVQDEKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQKGEVLTSEY
LNQLYADLNEKYYGLSKEDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTQDDIDHYLAYLKSGNSDYPL
EVIAKAGVDMAKGDYLEAAFKVFEERLIELEALVAKGVHR

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1120515 EL097_RS06615 WP_003044166.1 1288469..1290271(+) (pepF) [Streptococcus canis strain NCTC12191]
ATGACTGATAATCGTAGCCACTTAGAAAAAAAGTACACTTGGGATTTGAGCACTATTTTTGCAACTGATGAGATGTGGGA
AGCAGAGGTGAGCCAATTAACTACTGATGTTGAGGCTTCTAAAGAGTTTGCTGGTCATTTGCTGGATTCTAGTGCTAATT
TGTTAAAGATTACAAAGACGTATTTAGAATTGGCTCGTCGTGTGGAGAAAGTTTATGTTTATGCTCACATGAAAAATGAT
CAAGACACTACCGTTGCCAAGTATCAAGAATACCAAGCTAAGGCTTCAGGTTTGTATGCCAAATTTAGTGAGGTCTTTTC
ATTCTATGATCCAGAAGTAATGACGCTTAGTCAAGAGGATTACCAAACTTTCCTTACGGAAACCCCTGAGTTGAAAGGGT
ATAATCATTTCTTTGACAAATTATTCCAAGCACGCGAACATGTTCTCAGTCAAGCGGAAGAGGAATTATTAGCAGGGGCT
CAAGAAATTTTTAATGGTGCGGAAGAAACCTTTAGTATTCTTGATAATGCAGACATTGTTTTTCCGACGGTCAAAAATGA
TAAAGGAGAAGATGTTGAATTAACCCATGGTAATTTCATTAGCTTAATGGAATCTAAAGACCGTAGCGTTCGTCAAGCTG
CTTATGAGGCAATGTATAGTACTTATGAACAGTTCCAGCATACTTATGCAAAAACCTTACAGACAAATGTGAAGGTTCAA
AACTACAAGGCGCGTGTTCATAAATATAATTCAGCCCGTCAGGCTGCCATGGCTGCTAACTTTATTCCAGAAGCTGTTTA
TGATACCTTGTTAGAAACGGTTAATAAACATTTGCCGCTGTTACATCATTATTTGAAATTGCGTCAAGAGGTTCTTGGTT
TAGATGAATTGAAGATGTATGATGTTTACACACCGCTATCTGAAACAGATTTGGCTATTGGTTATGATGAGGCTTTGGAA
AAGGCAGAGAAGGTTTTGGCCGTTTTTGGTAAAGATTATGCAGACCGTGTGCACCGTGCTTTTACTGAACGCTGGATTGA
TGTTCATGTCAATAAAGGAAAACGTTCTGGAGCTTACTCAGGAGGTTCTTATGACACCAATGCCTTTATGCTATTAAACT
GGCAAGATACCTTGGATAATCTCTACACATTAGTTCATGAGACTGGTCACAGTTTGCATTCTACTTTTACGCGTGAAACA
CAGCCTTATGTGTATGGGGATTACAGTATTTTCTTGGCAGAAATTGCTTCAACGACGAATGAAAATATTATGACAGAAGC
TCTCTTAAACGAAGTTCAAGATGAGAAAGAACGTTTTGCGATTTTAAACCATTACCTTGATGGTTTCCGTGGAACAGTTT
TCCGTCAAACCCAATTTGCTGAGTTTGAACATGCTATTCACCAAGCTGATCAAAAAGGAGAAGTGTTAACAAGCGAATAC
CTTAACCAATTATACGCTGATTTAAATGAAAAATATTATGGTTTAAGTAAAGAGGATAATCATTTTATTCAGTATGAGTG
GGCACGTATTCCTCACTTCTATTACAATTATTATGTTTACCAATATGCAACAGGTTTTGCAGCCGCAAGCTATTTAGCAG
ATAAGATTGTTCACGGAACACAAGATGATATTGATCATTACTTGGCTTATCTCAAGTCAGGAAATTCTGATTACCCACTT
GAAGTGATTGCTAAAGCAGGCGTTGATATGGCAAAAGGGGACTATTTGGAAGCTGCCTTTAAGGTCTTTGAAGAACGCTT
AATAGAACTCGAAGCCCTCGTTGCAAAGGGTGTTCACCGTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.452

99.833

0.713

Multiple sequence alignment