Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   EL097_RS05270 Genome accession   NZ_LR134293
Coordinates   1013806..1014531 (+) Length   241 a.a.
NCBI ID   WP_003044963.1    Uniprot ID   A0A2D4DM13
Organism   Streptococcus canis strain NCTC12191     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1008806..1019531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL097_RS05240 (NCTC12191_01033) - 1009065..1010525 (+) 1461 WP_003044979.1 NCS2 family permease -
  EL097_RS05245 (NCTC12191_01034) tsaE 1010712..1011155 (+) 444 WP_039994873.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL097_RS05250 (NCTC12191_01035) - 1011148..1011672 (+) 525 WP_003044971.1 GNAT family N-acetyltransferase -
  EL097_RS05255 (NCTC12191_01036) brpA 1011681..1012952 (+) 1272 WP_003044969.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL097_RS05260 (NCTC12191_01037) - 1013001..1013318 (-) 318 WP_003044966.1 hypothetical protein -
  EL097_RS05265 (NCTC12191_01038) - 1013315..1013734 (-) 420 WP_003044965.1 HIT family protein -
  EL097_RS05270 (NCTC12191_01039) pptA 1013806..1014531 (+) 726 WP_003044963.1 ABC transporter ATP-binding protein Regulator
  EL097_RS05275 (NCTC12191_01040) - 1014534..1015568 (+) 1035 WP_003044958.1 ABC transporter permease -
  EL097_RS05280 (NCTC12191_01041) ccrZ 1015623..1016414 (+) 792 WP_003044956.1 cell cycle regulator CcrZ -
  EL097_RS05285 (NCTC12191_01042) trmB 1016414..1017049 (+) 636 WP_003044953.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL097_RS05295 (NCTC12191_01044) rimP 1017367..1017849 (+) 483 WP_051026415.1 ribosome maturation factor RimP -
  EL097_RS05300 (NCTC12191_01045) nusA 1018020..1019177 (+) 1158 WP_003044948.1 transcription termination factor NusA -
  EL097_RS05305 (NCTC12191_01046) rnpM 1019193..1019489 (+) 297 WP_003044945.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26543.88 Da        Isoelectric Point: 4.8524

>NTDB_id=1120507 EL097_RS05270 WP_003044963.1 1013806..1014531(+) (pptA) [Streptococcus canis strain NCTC12191]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGEISIDGLTLAENPADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAKPFLDMFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKTLEIEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLAELQATFGDPSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1120507 EL097_RS05270 WP_003044963.1 1013806..1014531(+) (pptA) [Streptococcus canis strain NCTC12191]
ATGTTAAACATTGAAAATCTAACGGGAGGCTACCTTAATATTCCCGTTTTAAAAGAGGTTTCATTTTCTGTTGGCAATGG
AGAATTGGTCGGTTTGATTGGCTTAAATGGAGCTGGAAAGTCAACGACCATCAATGAAATTATTGGTTTTTTAAAACCCT
ACAAGGGAGAAATCTCCATTGACGGCCTTACGCTTGCTGAAAATCCAGCAGACTACCGTAAAAAAATTGGTTTTATCCCA
GAAACTCCTAGTCTCTACGAAGAATTAACCTTAGCAGAGCATATTAATACTGTGGCTATGGCTTATGATATTGATGTGGA
GCTGGCCCAGAAACGGGCAAAGCCTTTTTTAGACATGTTTCGCTTGACAGATAAACTCGACTGGTTTCCTGTGCATTTTT
CAAAGGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCCAGCTTGTTTATTCTTGATGAGCCATTT
TTAGGGTTAGATCCACTAGCTATTTCGGACTTGATTAAGACTTTAGAGATTGAAAAAGCCAAAGGCAAATCTATTTTAAT
GAGTACTCACGTGCTAGACTCTGCTGAAAAAATGTGTGATCGTTTTGTGATTTTGCACCATGGTCAGGTGCGTGCTCAAG
GAACTCTTGCTGAGTTACAAGCGACCTTTGGAGATCCTTCGGCTAGCTTAAACGATATTTATTTGGCATTGACAAAAGAG
GGCTAG

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2D4DM13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751

  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743


Multiple sequence alignment