Detailed information NTG1120499

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: EL097_RS03795
• Genome accession: NZ_LR134293
• Coordinates: 722128..724572 (+)
• Length: 814 a.a.
• NCBI ID: WP_003045629.1
• Uniprot ID: A0AAV3FV19
• Organism: Streptococcus canis strain NCTC12191
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 717128..729572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL097_RS03765 (NCTC12191_00743)	-	717627..717905 (-)	279	WP_003045642.1	GNAT family N-acetyltransferase	-
EL097_RS03770 (NCTC12191_00744)	-	718003..719394 (-)	1392	WP_099982963.1	GNAT family N-acetyltransferase	-
EL097_RS03775 (NCTC12191_00745)	-	719408..719836 (-)	429	WP_003045638.1	MarR family winged helix-turn-helix transcriptional regulator	-
EL097_RS03780 (NCTC12191_00746)	-	719972..720928 (-)	957	WP_003045636.1	amidohydrolase family protein	-
EL097_RS03785	-	721265..721468 (+)	204	WP_003045634.1	cold-shock protein	-
EL097_RS03790 (NCTC12191_00748)	-	721667..722128 (+)	462	WP_003045631.1	CtsR family transcriptional regulator	-
EL097_RS03795 (NCTC12191_00749)	clpC	722128..724572 (+)	2445	WP_003045629.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
EL097_RS03800 (NCTC12191_00750)	groES	724750..725040 (+)	291	WP_003045628.1	co-chaperone GroES	-
EL097_RS03805 (NCTC12191_00751)	groL	725076..726701 (+)	1626	WP_003045626.1	chaperonin GroEL	-
EL097_RS10850 (NCTC12191_00752)	-	726957..727052 (+)	96	Protein_684	Rgg/GadR/MutR family transcriptional regulator	-
EL097_RS03815 (NCTC12191_00753)	-	727018..727533 (+)	516	WP_003045624.1	lanthionine synthetase LanC family protein	-
EL097_RS03820 (NCTC12191_00754)	-	727539..728756 (+)	1218	WP_003045622.1	MFS transporter	-
EL097_RS03825 (NCTC12191_00755)	-	729099..729569 (-)	471	WP_003045620.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 814 a.a.
• Molecular weight: 90301.97 Da
• Isoelectric Point: 6.8332

>NTDB_id=1120499 EL097_RS03795 WP_003045629.1 722128..724572(+) (clpC) [Streptococcus canis strain NCTC12191]
MIMYSLKMQEIFRQAQFQAARFDSHYLETWHILLAMARVDQSLAGLVLSEFDAKVAVEEYEAAAILAIGKNPKGQVSHVD
FKPQSKTLTNVLQFAQAISQITKDPEVGSEHVLFAMLLNPDIMASRLLEMAGYRIKDKGNGEPRLADLRKAIEIHAGYSK
ETIKTIHELRKPKKTKVQGTFSDMMKPPSTTGDLADFTRDLTEMAKQGLLEPVIGRDAEVSRMIQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIEADGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPNLEDAYQILLGLKTSYETYHNVSISD
QAVHTAVKMAHRYLTSKNLPDSAIDLLDEASATVQSMVKKSSSEIITPIDQALLDGDIKKVSRLLAKEAKGQTRRPRPVT
EDDIMATLSKLSGIPLEKLSQADSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDASALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQ
VLDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGVKGVSHDHQAMEKRILEELKKAYRPEFINRIDEKVVFH
SLTQENMREVVKIMVQPLIASLAEKGITLKFQPMALKYLSEEGYDVEMGARPLRRTLQTQVEDKLSELILAGDLASGHTL
KIGLSHGKLSFNVG

Nucleotide

• Length: 2445 bp

>NTDB_id=1120499 EL097_RS03795 WP_003045629.1 722128..724572(+) (clpC) [Streptococcus canis strain NCTC12191]
ATGATCATGTATTCATTGAAGATGCAAGAAATCTTTAGGCAGGCACAGTTTCAAGCAGCCCGCTTTGACAGCCACTACCT
AGAAACTTGGCATATCTTGTTAGCCATGGCTAGAGTTGACCAGTCCTTAGCAGGTCTAGTGCTAAGTGAATTTGATGCTA
AAGTTGCAGTGGAAGAATACGAAGCTGCCGCTATTTTAGCTATAGGAAAAAATCCTAAAGGTCAGGTGTCACACGTGGAT
TTCAAGCCTCAATCCAAGACCTTGACGAATGTGTTACAGTTTGCGCAGGCTATTAGTCAAATCACTAAAGACCCAGAAGT
CGGCTCTGAACATGTGCTCTTTGCCATGCTACTCAATCCTGATATTATGGCAAGTCGTCTCTTGGAAATGGCTGGGTATC
GCATCAAAGATAAAGGAAATGGGGAACCTCGCTTAGCTGATTTGCGAAAGGCCATTGAGATTCACGCAGGTTATAGCAAA
GAAACCATTAAGACTATCCATGAGTTACGCAAACCAAAGAAAACGAAGGTTCAAGGAACCTTCTCAGATATGATGAAACC
ACCAAGCACGACGGGTGATTTGGCTGACTTCACCAGAGATTTGACCGAGATGGCAAAACAAGGTCTGCTAGAGCCTGTCA
TTGGTCGTGATGCCGAAGTATCTCGCATGATTCAAGTGCTCAGTCGTAAAACCAAAAACAATCCTGTTCTTGTTGGAGAT
GCAGGGGTTGGTAAAACTGCCCTTGCCTATGGTCTTGCCCAACGTATTGTGAATGGAGCCATTCCTTATGAACTGCAAGA
CATGCGCGTCCTCGAATTGGACATGATGAGCGTCGTTGCGGGGACACGTTTTCGTGGTGATTTTGAAGAACGCATGAACC
AGATTATTGATGACATTGAAGCAGATGGCAAGATTATCCTCTTTGTGGATGAATTGCATACCATTATGGGGTCAGGAAGC
GGTATTGATAGCACACTTGATGCTGCTAATATTTTGAAACCAGCCCTATCTCGTGGCACCCTTCACATGGTCGGAGCAAC
AACGCAGGAAGAGTACCAAAAACATATTGAAAAGGACGCCGCTCTTTCTCGCCGCTTTGCCAAAATTTTAATTGAAGAGC
CTAACCTAGAAGACGCCTATCAGATTTTACTAGGTTTGAAGACTTCCTATGAAACCTACCATAATGTGTCAATTTCTGAT
CAGGCAGTGCATACAGCTGTTAAAATGGCGCATCGCTACCTAACTAGTAAAAATCTTCCAGATTCAGCCATCGATTTGTT
GGACGAAGCTAGCGCTACAGTCCAAAGCATGGTTAAAAAATCAAGTTCGGAAATCATCACACCAATAGATCAGGCACTTC
TTGACGGTGATATAAAAAAGGTTTCACGTCTTTTGGCCAAAGAAGCTAAGGGGCAGACGAGAAGGCCAAGGCCAGTAACA
GAAGACGATATTATGGCAACCCTGAGCAAATTATCAGGGATTCCATTGGAAAAACTCAGTCAGGCTGATAGCAAAAAATA
CCTCAATCTTGAAAAAGAGTTGCACAAGCGCGTGATTGGACAAGAAGACGCTGTTTCAGCCATTTCTAGAGCAATCCGTC
GTAATCAATCGGGTATTCGCACTGGTAAACGTCCAATTGGTTCTTTCATGTTCCTTGGACCTACTGGTGTTGGGAAGACT
GAATTGGCTAAAGCTTTGGCAGAAGTCCTCTTTGATGACGCGTCAGCCCTTATCCGCTTTGACATGTCAGAGTATATGGA
AAAATTTGCGGCATCTCGCCTTAATGGAGCGCCTCCAGGCTATGTTGGTTACGATGAAGGCGGTGAATTAACAGAGAAGG
TCAGAAATAAGCCTTATTCTGTCCTCCTCTTTGACGAGGTGGAAAAAGCCCACCCTGACATTTTCAACGTGCTCTTACAA
GTGCTTGATGACGGTATGTTGACAGATAGCCGTGGGCGTAAGGTGGACTTCTCAAACACCATTATTATCATGACTAGTAA
TCTAGGGGCAACAGCTCTGCGGGATGATAAAACAGTTGGCTTTGGGGTAAAAGGGGTCAGCCATGACCACCAAGCCATGG
AAAAACGGATTTTGGAAGAATTGAAAAAAGCTTATCGACCAGAATTTATCAACCGAATTGATGAAAAGGTTGTCTTCCAT
AGCCTTACCCAAGAGAATATGAGGGAAGTGGTTAAGATTATGGTGCAGCCATTGATTGCTAGTTTAGCAGAAAAAGGCAT
TACCCTCAAATTCCAGCCAATGGCTCTCAAGTACCTTTCAGAGGAAGGCTATGATGTGGAAATGGGTGCTCGTCCATTGC
GCCGTACTTTGCAAACGCAGGTAGAAGACAAACTATCCGAATTGATTCTTGCTGGTGACTTGGCAAGTGGTCACACCCTG
AAAATTGGGCTTTCCCATGGCAAACTCAGCTTTAACGTTGGGTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (722-801)

• AAA domain (Cdc48 subfamily) (AAA_2) (544-715)

• ATPase family associated with various cellular activities (AAA) (AAA) (236-368)

• AAA lid domain (AAA_lid_9) (376-453)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (95-132)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (15-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	76.015	99.877	0.759
clpC	Streptococcus thermophilus LMG 18311	72.181	100	0.724
clpC	Streptococcus thermophilus LMD-9	72.181	100	0.724
clpC	Streptococcus pneumoniae TIGR4	65.725	100	0.657
clpC	Streptococcus pneumoniae Rx1	65.725	100	0.657
clpC	Streptococcus pneumoniae D39	65.725	100	0.657
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	48.449	100	0.499
clpC	Bacillus subtilis subsp. subtilis str. 168	43.87	100	0.448