Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL084_RS01135 Genome accession   NZ_LR134292
Coordinates   214116..214841 (+) Length   241 a.a.
NCBI ID   WP_115254886.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC10389     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 209116..219841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS01105 (NCTC10389_00231) tsaE 209771..210214 (+) 444 WP_044023456.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL084_RS01110 (NCTC10389_00232) - 210207..210719 (+) 513 WP_126439933.1 GNAT family N-acetyltransferase -
  EL084_RS01115 (NCTC10389_00233) brpA 210730..211893 (+) 1164 WP_126439934.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL084_RS01120 - 211939..213192 (-) 1254 Protein_191 ISL3 family transposase -
  EL084_RS01125 (NCTC10389_00234) - 213323..213637 (-) 315 WP_115254885.1 hypothetical protein -
  EL084_RS01130 (NCTC10389_00235) - 213634..214053 (-) 420 WP_074480785.1 HIT family protein -
  EL084_RS01135 (NCTC10389_00236) pptA 214116..214841 (+) 726 WP_115254886.1 ABC transporter ATP-binding protein Regulator
  EL084_RS01140 (NCTC10389_00237) - 214844..215878 (+) 1035 WP_126439935.1 ABC transporter permease -
  EL084_RS01145 (NCTC10389_00238) ccrZ 215912..216745 (+) 834 WP_115254888.1 cell cycle regulator CcrZ -
  EL084_RS01150 (NCTC10389_00239) trmB 216745..217383 (+) 639 WP_126439936.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL084_RS01155 (NCTC10389_00240) - 217685..218632 (+) 948 WP_413081338.1 diguanylate cyclase -
  EL084_RS01160 (NCTC10389_00241) - 218638..219705 (+) 1068 WP_126439937.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26676.96 Da        Isoelectric Point: 4.6769

>NTDB_id=1120425 EL084_RS01135 WP_115254886.1 214116..214841(+) (pptA) [Streptococcus equinus strain NCTC10389]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLDNNQADYRKKIGFIP
ETPSLYEELTLREHLETVAMAYGLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIVCAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELRETFGQEDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1120425 EL084_RS01135 WP_115254886.1 214116..214841(+) (pptA) [Streptococcus equinus strain NCTC10389]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGTCTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGATAATAATCAAGCTGATTATCGTAAAAAAATCGGTTTTATTCCT
GAAACGCCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAACTGTTGCTATGGCTTATGGTCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGTTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTGTTTGTGCTTTCATGGTTAATCCAAGTTTATTTATCGTCGATGAACCGTTT
TTGGGGTTGGATCCGTTGGCTATTTCTGATTTAACAGATTTGCTGGCGCAAGAAAAGGCTAAAGGTAAGGCGATTTTGAT
GTCGACACACGTGTTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTAGCTGAATTGCGAGAAACTTTCGGTCAGGAAGACGCTAGTTTAAATGATATCTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.498

99.17

0.788
  pptA Streptococcus thermophilus LMD-9

78.243

99.17

0.776

Multiple sequence alignment