Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL092_RS09960 | Genome accession | NZ_LR134291 |
| Coordinates | 2049228..2051657 (-) | Length | 809 a.a. |
| NCBI ID | WP_012130976.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain NCTC7868 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2044228..2056657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL092_RS09935 (NCTC7868_01987) | dusB | 2044353..2045330 (+) | 978 | WP_041789808.1 | tRNA dihydrouridine synthase DusB | - |
| EL092_RS09940 (NCTC7868_01988) | - | 2045370..2046044 (-) | 675 | WP_012130972.1 | hypothetical protein | - |
| EL092_RS09945 (NCTC7868_01989) | - | 2046281..2047069 (-) | 789 | WP_012130973.1 | NUDIX domain-containing protein | - |
| EL092_RS09950 (NCTC7868_01990) | pnuC | 2047113..2047928 (-) | 816 | WP_012130974.1 | nicotinamide riboside transporter PnuC | - |
| EL092_RS09955 (NCTC7868_01991) | - | 2047950..2049008 (-) | 1059 | WP_012130975.1 | AAA family ATPase | - |
| EL092_RS09960 (NCTC7868_01992) | clpC | 2049228..2051657 (-) | 2430 | WP_012130976.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL092_RS09965 (NCTC7868_01993) | - | 2051664..2052122 (-) | 459 | WP_012130977.1 | CtsR family transcriptional regulator | - |
| EL092_RS09970 (NCTC7868_01994) | - | 2052441..2052791 (+) | 351 | WP_041789810.1 | hypothetical protein | - |
| EL092_RS09975 (NCTC7868_01995) | tsf | 2052899..2053942 (-) | 1044 | WP_012130978.1 | translation elongation factor Ts | - |
| EL092_RS09980 (NCTC7868_01996) | rpsB | 2054021..2054803 (-) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90163.99 Da Isoelectric Point: 6.5945
>NTDB_id=1120398 EL092_RS09960 WP_012130976.1 2049228..2051657(-) (clpC) [Streptococcus gordonii strain NCTC7868]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSDLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSDLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=1120398 EL092_RS09960 WP_012130976.1 2049228..2051657(-) (clpC) [Streptococcus gordonii strain NCTC7868]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGGAAATCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTTAAGGGCCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCTGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTGATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGGCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACCGAGTTGGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCAGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTAACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGTGCAACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTAAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGAGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGGAAATCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTTAAGGGCCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCTGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTGATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGGCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACCGAGTTGGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCAGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTAACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGTGCAACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTAAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGAGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae D39 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae TIGR4 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus mutans UA159 |
67.75 |
98.888 |
0.67 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.298 |
100 |
0.666 |
| clpC | Streptococcus thermophilus LMD-9 |
66.175 |
100 |
0.665 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.161 |
100 |
0.507 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.994 |
100 |
0.461 |
| clpE | Streptococcus mutans UA159 |
47.91 |
76.885 |
0.368 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |