Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   EL092_RS02720 Genome accession   NZ_LR134291
Coordinates   582459..583190 (+) Length   243 a.a.
NCBI ID   WP_008808542.1    Uniprot ID   A8AVP4
Organism   Streptococcus gordonii strain NCTC7868     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 577459..588190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL092_RS02690 (NCTC7868_00532) - 577848..579272 (+) 1425 WP_012000036.1 NCS2 family permease -
  EL092_RS02695 (NCTC7868_00533) tsaE 579355..579801 (+) 447 WP_041789558.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL092_RS02700 (NCTC7868_00534) - 579801..580325 (+) 525 WP_041789560.1 GNAT family N-acetyltransferase -
  EL092_RS02705 (NCTC7868_00535) brpA 580332..581543 (+) 1212 WP_012000039.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL092_RS02710 (NCTC7868_00536) - 581591..581893 (-) 303 WP_012000040.1 hypothetical protein -
  EL092_RS02715 (NCTC7868_00537) - 581904..582320 (-) 417 WP_041789561.1 HIT family protein -
  EL092_RS02720 (NCTC7868_00538) pptA 582459..583190 (+) 732 WP_008808542.1 ABC transporter ATP-binding protein Regulator
  EL092_RS02725 (NCTC7868_00539) pptB 583187..584242 (+) 1056 WP_012000042.1 ABC transporter permease Regulator
  EL092_RS02730 (NCTC7868_00540) ccrZ 584283..585077 (+) 795 WP_008808544.1 cell cycle regulator CcrZ -
  EL092_RS02735 (NCTC7868_00541) trmB 585074..585712 (+) 639 WP_012000043.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL092_RS02740 (NCTC7868_00542) rimP 585821..586309 (+) 489 WP_012000044.1 ribosome maturation factor RimP -
  EL092_RS02745 (NCTC7868_00543) nusA 586355..587596 (+) 1242 WP_012000045.1 transcription termination factor NusA -
  EL092_RS02750 (NCTC7868_00544) rnpM 587607..587903 (+) 297 WP_008808548.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26859.31 Da        Isoelectric Point: 4.5712

>NTDB_id=1120343 EL092_RS02720 WP_008808542.1 582459..583190(+) (pptA) [Streptococcus gordonii strain NCTC7868]
MLEIKGLTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYQGEILIDGLSLKSDRTAYRKKIGFIP
ETPSLYEELTLKEHIETVAMAYDIDSQTAIDRVEKLLQIFRLKDKLDWFPVNFSKGMKQKVMIICAFVIDPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAQLREEFSLPEASLNEIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1120343 EL092_RS02720 WP_008808542.1 582459..583190(+) (pptA) [Streptococcus gordonii strain NCTC7868]
ATGTTAGAAATAAAAGGGCTTACAGGTGGCTATGTCAATATTCCTGTTTTGAAAGATGTCAGTTTTGAAGTTGGAGACGG
TCAGCTTGTTGGACTGATTGGTCTAAACGGGGCTGGAAAGTCAACAACCATCAATGAAATAATCGGTCTCTTGACGCCTT
ATCAAGGGGAAATTTTGATAGATGGTTTGAGCCTGAAGTCAGACAGGACAGCCTATCGCAAAAAGATTGGTTTTATACCT
GAAACACCGAGTCTCTATGAAGAATTAACCTTGAAGGAACATATTGAGACGGTTGCTATGGCTTATGATATTGACTCGCA
AACAGCAATAGATCGAGTGGAAAAATTGCTTCAGATTTTTCGTCTTAAAGACAAGTTGGATTGGTTCCCGGTCAATTTCT
CAAAGGGAATGAAGCAGAAGGTTATGATCATCTGTGCCTTTGTGATTGACCCTAGTTTGTTTATTGTGGATGAACCCTTT
TTAGGATTGGATCCTCTGGCCATCTCTGATTTGATTGAGCTCTTGGCAGAAGAAAAGGCTAAAGGGAAGTCTATCCTGAT
GAGTACTCATGTGCTTGATTCGGCAGAGAAAATGTGCGATTCTTTTGTTATCTTGCACAAGGGTCAGGTACGGGCTAAAG
GAAATTTAGCACAGTTGCGAGAAGAATTTTCATTGCCAGAAGCAAGTCTCAATGAAATCTACCTAGCTTTGACAGAAGAG
GCTGCCCTATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A8AVP4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

98.354

0.728

  pptA Streptococcus thermophilus LMD-9

73.222

98.354

0.72


Multiple sequence alignment