Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   EL111_RS08435 Genome accession   NZ_LR134287
Coordinates   1835917..1837956 (-) Length   679 a.a.
NCBI ID   WP_123794640.1    Uniprot ID   A0A5P3MRQ6
Organism   Neisseria animalis strain NCTC10212     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1830917..1842956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL111_RS08420 (NCTC10212_01735) - 1831445..1832095 (-) 651 WP_123794638.1 GrxB family glutaredoxin -
  EL111_RS08425 (NCTC10212_01736) - 1832295..1834499 (+) 2205 WP_123794639.1 RelA/SpoT family protein -
  EL111_RS08430 (NCTC10212_01737) trhA 1834570..1835196 (-) 627 WP_123794730.1 PAQR family membrane homeostasis protein TrhA -
  EL111_RS08435 (NCTC10212_01738) recG 1835917..1837956 (-) 2040 WP_123794640.1 ATP-dependent DNA helicase RecG Machinery gene
  EL111_RS08440 (NCTC10212_01740) - 1838129..1839175 (+) 1047 WP_197717788.1 sulfate ABC transporter substrate-binding protein -
  EL111_RS08445 (NCTC10212_01742) - 1839635..1839886 (+) 252 WP_123794641.1 DUF1289 domain-containing protein -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75179.98 Da        Isoelectric Point: 7.7268

>NTDB_id=1120221 EL111_RS08435 WP_123794640.1 1835917..1837956(-) (recG) [Neisseria animalis strain NCTC10212]
MLPVHQKQLKITDVSAKKLEKLNLHTPWDIVLHLPLRYEDETHIMPIADAPAGTPCQVEGEVLHQEVQFKPRKQLIVQIA
DGSGSVLHLRFIHFYPSHQKQMAVGKRIRAVGEIKRGFYGDEMIHPKIRDAENSGLAESLTPVYPTVNGLNQPTLRRIIQ
TALEVVPLHDTLPDGLLGRLKLPHLAESLRLLHAPPPSFTIYQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTAK
SLKESGELSGKLIRSLPFTLTAAQQRVLSEIRADLAQTHPMHRLLQGDVGSGKTIVAALSALTAIEAGCQVAVMAPTEIL
AEQHYIKFKQWFEPMGLAVAWLSGSQRKKEKEQNKAAVSDGLAPIAVGTHALFQDDVQFQNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNNARRAEVEGFVLNTCRKGQQAYWVCPLIE
ESEPLQLQTATETLEALQAALPELSVGLVHGRMKAAEKAGVMAEFSAGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASHCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEED
LHLLEKARETAPQLIEQRPDIVEAHLERWLSSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=1120221 EL111_RS08435 WP_123794640.1 1835917..1837956(-) (recG) [Neisseria animalis strain NCTC10212]
ATGCTGCCCGTTCACCAAAAACAGCTCAAAATCACCGACGTTTCCGCCAAAAAGCTGGAAAAACTCAATCTGCACACGCC
GTGGGACATCGTGCTGCACCTGCCGCTGCGCTATGAAGACGAAACCCACATCATGCCGATTGCCGACGCACCCGCCGGCA
CGCCCTGCCAAGTGGAGGGCGAAGTGCTGCATCAGGAAGTGCAGTTCAAACCGCGCAAGCAGCTTATCGTACAGATTGCA
GACGGCTCGGGCAGTGTGCTGCACCTGCGTTTTATCCACTTCTACCCCAGCCATCAGAAACAGATGGCGGTGGGCAAACG
CATCCGCGCCGTGGGCGAAATCAAACGCGGTTTTTACGGCGACGAGATGATTCACCCGAAAATCCGCGATGCCGAAAACA
GCGGGCTGGCCGAAAGCCTCACGCCGGTGTATCCCACTGTAAACGGCCTCAACCAGCCCACCTTGCGCCGCATCATTCAG
ACGGCCTTGGAAGTGGTTCCGCTGCACGACACCCTGCCCGACGGATTATTAGGCCGTCTGAAACTGCCGCATCTGGCCGA
AAGCCTGCGCCTTTTGCACGCGCCGCCGCCCAGCTTTACCATCTACCAACTTTCAGACGGCACGCTCCCCGCATGGCAGC
GGCTCAAATTCGACGAACTTCTGGCGCAGCAATTATCCATGCGGCTGGCGCGGCAAAAACGCGTCAGTGGTACGGCTAAG
TCGTTGAAAGAAAGTGGAGAATTATCCGGTAAGCTCATTCGCAGCCTGCCATTTACCCTTACTGCCGCCCAGCAGCGCGT
CTTAAGCGAAATCCGCGCTGACCTCGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCAAAA
CCATTGTTGCCGCGCTCTCTGCGCTTACCGCCATCGAAGCCGGCTGCCAAGTCGCGGTGATGGCACCCACCGAAATCCTT
GCCGAGCAGCACTACATTAAGTTCAAACAATGGTTTGAGCCTATGGGCTTGGCCGTGGCATGGCTTTCCGGCAGCCAGCG
CAAAAAAGAAAAAGAGCAAAACAAAGCCGCCGTTTCAGACGGCCTCGCCCCGATTGCCGTCGGCACGCACGCGCTGTTTC
AAGACGACGTGCAGTTTCAAAATTTAGGCTTGGTGATTGTCGACGAGCAGCACCGTTTCGGTGTGGCGCAGCGTTTGGCC
TTGAAAAACAAAGGCCAAGACGTACACCAACTGATGATGTCGGCTACTCCTATCCCACGCACGCTGGCGATGAGCTTCTT
CGCCGACCTCGACGTTTCCGTGATTGACGAATTGCCGCCCAACCGCACCCCGATTAAAACACGGCTGGTCAACAACGCCC
GCCGCGCCGAAGTCGAAGGCTTCGTGTTGAACACCTGCCGCAAAGGACAGCAGGCCTATTGGGTCTGCCCCCTGATTGAA
GAGAGCGAACCCCTGCAACTGCAAACCGCCACCGAAACCCTCGAAGCCCTTCAAGCGGCCTTGCCCGAATTATCCGTCGG
CCTCGTGCACGGGCGCATGAAAGCCGCCGAAAAAGCCGGCGTGATGGCCGAATTTTCCGCAGGCCGTCTGAATGTTTTAG
TGGCCACCACCGTCATTGAAGTCGGTGTGGACGTGCCCAACGCCAGCCTGATGGTCATCGAACACGCCGAACGCATGGGC
TTGGCGCAACTGCACCAACTGCGCGGGCGCGTCGGGCGCGGAGCCGCCGCCAGCCATTGCGTGCTGCTGTTTGCCGAGCC
GTTAAGCGAACTGGCCAAAGCACGTCTGAAAGTGATTTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACCTCA
ATATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTACCCATGCTGCGCTTCGCCAACCTCGAAGAAGAC
CTGCACCTCTTGGAAAAAGCCCGCGAAACCGCCCCGCAACTGATCGAACAGCGGCCGGATATTGTGGAGGCGCATTTGGA
GAGATGGTTGAGCAGTCGGGAAGGGTATTTGGGGGTGTGA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-664)

RecG wedge domain (RecG_wedge)

(14-166)

DEAD/DEAH box helicase (DEAD)

(281-418)

Helicase conserved C-terminal domain (Helicase_C)

(467-574)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P3MRQ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.125

100

0.851

Multiple sequence alignment