Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | EL100_RS04480 | Genome accession | NZ_LR134285 |
| Coordinates | 884773..886110 (+) | Length | 445 a.a. |
| NCBI ID | WP_232011427.1 | Uniprot ID | - |
| Organism | Streptococcus australis strain NCTC3168 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 879773..891110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL100_RS04465 (NCTC3168_00919) | - | 882821..883510 (+) | 690 | WP_125329260.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| EL100_RS04470 (NCTC3168_00920) | - | 883748..884194 (+) | 447 | WP_126405079.1 | dUTP diphosphatase | - |
| EL100_RS04475 (NCTC3168_00921) | - | 884196..884735 (+) | 540 | WP_126404920.1 | histidine phosphatase family protein | - |
| EL100_RS04480 (NCTC3168_00922) | radA | 884773..886110 (+) | 1338 | WP_232011427.1 | DNA repair protein RadA | Machinery gene |
| EL100_RS04485 (NCTC3168_00923) | - | 886192..886887 (+) | 696 | WP_023024583.1 | TIGR00266 family protein | - |
| EL100_RS04490 (NCTC3168_00924) | - | 887034..887531 (+) | 498 | WP_023024580.1 | beta-class carbonic anhydrase | - |
| EL100_RS04495 (NCTC3168_00925) | - | 887701..889716 (+) | 2016 | WP_232011419.1 | DUF2079 domain-containing protein | - |
Sequence
Protein
Download Length: 445 a.a. Molecular weight: 48388.63 Da Isoelectric Point: 5.8067
>NTDB_id=1120177 EL100_RS04480 WP_232011427.1 884773..886110(+) (radA) [Streptococcus australis strain NCTC3168]
MCQNCAYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLADVTSINVHRTKTEMEEFNRVLGGGVVPG
SLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPNFLI
IDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILR
AVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAKRTTTGLDF
NRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKELPTNPQEAFIGEIGLTGEIRRVTRIEQR
INEAAKLGFTKIYAPKNSLQGIAIPNGIQVIAVSTVGEVLKRVFS
MCQNCAYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLADVTSINVHRTKTEMEEFNRVLGGGVVPG
SLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPNFLI
IDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILR
AVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAKRTTTGLDF
NRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKELPTNPQEAFIGEIGLTGEIRRVTRIEQR
INEAAKLGFTKIYAPKNSLQGIAIPNGIQVIAVSTVGEVLKRVFS
Nucleotide
Download Length: 1338 bp
>NTDB_id=1120177 EL100_RS04480 WP_232011427.1 884773..886110(+) (radA) [Streptococcus australis strain NCTC3168]
ATTTGTCAAAATTGTGCCTACAATTCACCTAAGTATCTAGGGCGCTGTCCTAACTGTGGTTCTTGGTCTTCTTTTGTCGA
GGAGGTTGAGGTCGCCGAGGTCAAGAATGCCCGTGTGTCCTTGACAGGTGAGAAAACCAAGCCCATGAAACTGGCGGATG
TGACCTCTATCAATGTCCATCGTACCAAGACGGAAATGGAGGAATTCAACCGCGTCCTTGGAGGTGGTGTCGTCCCAGGA
AGTCTCGTCCTCATCGGGGGAGATCCAGGGATTGGGAAGTCTACTCTCCTCCTTCAAGTATCGACCCAACTATCTCAAGT
GGGAACAGTTCTCTATGTCAGTGGCGAGGAGTCGGCCCAGCAGATCAAGTTACGGGCAGAGCGCTTGGGGGATATCGATA
GCGAGTTTTACCTCTATGCTGAGACCAATATGCAAAGCGTGCGTGCGGAAGTGGAACGCATCCAGCCTAACTTCCTTATC
ATCGACTCCATCCAGACCATTATGTCTCCGGAGATTTCAGGGGTACAGGGATCGGTTTCTCAGGTGCGCGAGGTGACGGC
TGAGCTCATGCAGCTGGCCAAAACCAATAACATCGCCATCTTTATCGTCGGTCATGTGACCAAGGAAGGAACCTTGGCGG
GCCCGCGTATGCTGGAGCACATGGTGGATACGGTGCTCTACTTTGAGGGGGAACGCCACCACACCTTCCGGATCCTGAGA
GCGGTGAAAAATCGCTTTGGCTCGACCAATGAGATTGGAATCTTTGAGATGCAATCAGGTGGACTGGTCGAAGTCCTCAA
TCCCAGTCAGGTCTTTCTAGAAGAACGTTTGGATGGGGCGACTGGCTCTGCCATTGTCGTCACCATGGAAGGAAGTAGAC
CAATCTTGGCGGAAGTTCAGGCCTTGGTGACACCGACTGTATTTGGAAATGCCAAGCGGACGACAACGGGTCTTGACTTT
AATCGGGTCAGCCTCATCATGGCTGTGTTAGAGAAACGTTGCGGACTTCTTCTCCAAAATCAGGATGCCTATCTCAAGTC
AGCTGGTGGTGTCAAACTGGACGAACCAGCCATTGACTTAGCCGTAGCGGTGGCCATTGCTTCTAGCTACAAGGAGCTTC
CAACCAATCCTCAAGAGGCCTTTATCGGTGAGATTGGCTTGACTGGGGAGATTCGTCGCGTGACTCGGATTGAGCAACGG
ATCAACGAAGCGGCTAAACTTGGCTTCACTAAGATTTATGCGCCAAAAAATTCTCTCCAAGGCATCGCGATCCCAAATGG
CATTCAAGTGATAGCTGTCTCTACTGTAGGAGAGGTTCTTAAAAGAGTCTTTTCTTAA
ATTTGTCAAAATTGTGCCTACAATTCACCTAAGTATCTAGGGCGCTGTCCTAACTGTGGTTCTTGGTCTTCTTTTGTCGA
GGAGGTTGAGGTCGCCGAGGTCAAGAATGCCCGTGTGTCCTTGACAGGTGAGAAAACCAAGCCCATGAAACTGGCGGATG
TGACCTCTATCAATGTCCATCGTACCAAGACGGAAATGGAGGAATTCAACCGCGTCCTTGGAGGTGGTGTCGTCCCAGGA
AGTCTCGTCCTCATCGGGGGAGATCCAGGGATTGGGAAGTCTACTCTCCTCCTTCAAGTATCGACCCAACTATCTCAAGT
GGGAACAGTTCTCTATGTCAGTGGCGAGGAGTCGGCCCAGCAGATCAAGTTACGGGCAGAGCGCTTGGGGGATATCGATA
GCGAGTTTTACCTCTATGCTGAGACCAATATGCAAAGCGTGCGTGCGGAAGTGGAACGCATCCAGCCTAACTTCCTTATC
ATCGACTCCATCCAGACCATTATGTCTCCGGAGATTTCAGGGGTACAGGGATCGGTTTCTCAGGTGCGCGAGGTGACGGC
TGAGCTCATGCAGCTGGCCAAAACCAATAACATCGCCATCTTTATCGTCGGTCATGTGACCAAGGAAGGAACCTTGGCGG
GCCCGCGTATGCTGGAGCACATGGTGGATACGGTGCTCTACTTTGAGGGGGAACGCCACCACACCTTCCGGATCCTGAGA
GCGGTGAAAAATCGCTTTGGCTCGACCAATGAGATTGGAATCTTTGAGATGCAATCAGGTGGACTGGTCGAAGTCCTCAA
TCCCAGTCAGGTCTTTCTAGAAGAACGTTTGGATGGGGCGACTGGCTCTGCCATTGTCGTCACCATGGAAGGAAGTAGAC
CAATCTTGGCGGAAGTTCAGGCCTTGGTGACACCGACTGTATTTGGAAATGCCAAGCGGACGACAACGGGTCTTGACTTT
AATCGGGTCAGCCTCATCATGGCTGTGTTAGAGAAACGTTGCGGACTTCTTCTCCAAAATCAGGATGCCTATCTCAAGTC
AGCTGGTGGTGTCAAACTGGACGAACCAGCCATTGACTTAGCCGTAGCGGTGGCCATTGCTTCTAGCTACAAGGAGCTTC
CAACCAATCCTCAAGAGGCCTTTATCGGTGAGATTGGCTTGACTGGGGAGATTCGTCGCGTGACTCGGATTGAGCAACGG
ATCAACGAAGCGGCTAAACTTGGCTTCACTAAGATTTATGCGCCAAAAAATTCTCTCCAAGGCATCGCGATCCCAAATGG
CATTCAAGTGATAGCTGTCTCTACTGTAGGAGAGGTTCTTAAAAGAGTCTTTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus pneumoniae Rx1 |
93.708 |
100 |
0.937 |
| radA | Streptococcus pneumoniae D39 |
93.708 |
100 |
0.937 |
| radA | Streptococcus pneumoniae R6 |
93.708 |
100 |
0.937 |
| radA | Streptococcus pneumoniae TIGR4 |
93.708 |
100 |
0.937 |
| radA | Streptococcus mitis SK321 |
93.708 |
100 |
0.937 |
| radA | Streptococcus mitis NCTC 12261 |
93.483 |
100 |
0.935 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
62.247 |
100 |
0.622 |