Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL100_RS04315 | Genome accession | NZ_LR134285 |
| Coordinates | 849106..851535 (+) | Length | 809 a.a. |
| NCBI ID | WP_126404940.1 | Uniprot ID | - |
| Organism | Streptococcus australis strain NCTC3168 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 844106..856535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL100_RS04305 (NCTC3168_00889) | - | 844714..848409 (+) | 3696 | WP_126404942.1 | alpha-L-fucosidase | - |
| EL100_RS04310 (NCTC3168_00890) | - | 848640..849098 (+) | 459 | WP_126404941.1 | CtsR family transcriptional regulator | - |
| EL100_RS04315 (NCTC3168_00891) | clpC | 849106..851535 (+) | 2430 | WP_126404940.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL100_RS04320 (NCTC3168_00892) | - | 851547..852035 (+) | 489 | WP_126404939.1 | ECF transporter S component | - |
| EL100_RS04325 (NCTC3168_00893) | - | 852016..852420 (+) | 405 | WP_023024640.1 | DUF4430 domain-containing protein | - |
| EL100_RS04330 (NCTC3168_00894) | - | 852583..853317 (+) | 735 | WP_126404938.1 | hypothetical protein | - |
| EL100_RS04335 (NCTC3168_00895) | - | 853520..854578 (+) | 1059 | WP_126404937.1 | AAA family ATPase | - |
| EL100_RS04340 (NCTC3168_00896) | pnuC | 854591..855373 (+) | 783 | WP_126404936.1 | nicotinamide riboside transporter PnuC | - |
| EL100_RS04345 (NCTC3168_00897) | - | 855374..856171 (+) | 798 | WP_126404935.1 | NUDIX domain-containing protein | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89883.53 Da Isoelectric Point: 5.7046
>NTDB_id=1120176 EL100_RS04315 WP_126404940.1 849106..851535(+) (clpC) [Streptococcus australis strain NCTC3168]
MNYSKALLETIEAAQILAGHFESQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMKRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEEGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNEGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
MNYSKALLETIEAAQILAGHFESQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMKRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEEGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRAQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYANRYLTSRLLPDSAIDLLDEAAATVQNEGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
Nucleotide
Download Length: 2430 bp
>NTDB_id=1120176 EL100_RS04315 WP_126404940.1 849106..851535(+) (clpC) [Streptococcus australis strain NCTC3168]
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGAGTCCCAAACGCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCCAATAATCCTTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGATGCGGCTGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTCGAAGAAATCATGAAACGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTCTTGGCGCTTCTATTAGAGCGGGGGACCTTGGCTTCTCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGAGGGCATTAAAATCGTCGAGCTTCGTAAGAGCTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCC
ATTCGTTCTCTCTATCGGGCCCAGCAACCCAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGTCGGGGTCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAACCCGGTCCTGGTCGGTGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGTGGAGATGTCCCGACGGAGCTGGCTAAGATGCGGGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACGCGGTTCCGTGGAGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGCCATGTTATCCTCTTCATCGATGAGCTCCATACCATTATGGGATCTGGCTCTGGGATTGACTCTACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGCACCTTGCGGACCGTAGGAGCGACCACGCAAGAAGAATA
CCAAAAACACATTGAAAAAGACGCTGCTCTGTCACGCCGCTTTGCCAAGGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATCGCGATTTTGCAAGGGCTCAAGAAGACCTATGAACGTCACCACCGCGTCCATATTACGGATGCGGCTATTGAGACA
GCTGTTGTCTATGCCAATCGTTATTTGACCAGTCGCCTCTTGCCTGACTCCGCCATTGACCTCTTGGATGAAGCAGCAGC
GACCGTGCAAAATGAGGGGCCTCAAGCCGGTCTTCAGTCCGACTTGACAGCTGCTGATCAAGCCTTGCTCAAGGGGCAGT
GGAAAAAAGTTGCTCAGTTGCTAAAAGAAGATGCCAGTCCAAAAGGCTACCAGCTAGAAGTCAAGGAAGAGGATATCCTG
AAGACGCTCAGTCAATTGTCAGGCATTCCTGTGGAGAAACTAACCCAAACAGCGGCTAAGAAATACCTTGAATTGGAAGC
AGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGCCGAGCGATCCGTCGTAATCAGTCGGGAA
TTCGGTCTCACAAGCGGCCGATTGGTTCCTTCCTCTTCCTCGGTCCGACTGGGGTCGGGAAAACCGAGCTTGCCAAGGCC
CTTGCAGAGGTCCTCTTTGATGATGAGTCTGCTTTGATCCGCTTTGACATGAGTGAATATATGGAGAAATTTGCGGCCAG
TCGTCTCAACGGTGCCCCTCCAGGCTATGTCGGTTATGAAGAAGGGGGCGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAATGTTCTCTTGCAAGTCTTGGATGACGGT
GTCTTGACCGACAGCAAGGGACGCAAGGTGGACTTCTCTAATACGATTATAATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGCTTTGGCGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAGAAACGCATCTTTG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCGCTGGTTCAATCTCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCGTCTGCTCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTTAAG
TCTGGTCAGCTTAACTTTACGATTGACTAG
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGAGTCCCAAACGCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCCAATAATCCTTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGATGCGGCTGAGCACATTACGGGTCAAGTCTACCAACGGGATGGCCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTCGAAGAAATCATGAAACGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTCTTGGCGCTTCTATTAGAGCGGGGGACCTTGGCTTCTCAAGTATTGGAGTATGTCGGCTTCCGCTATGATGATC
AGGAAGAGGGCATTAAAATCGTCGAGCTTCGTAAGAGCTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCC
ATTCGTTCTCTCTATCGGGCCCAGCAACCCAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGTCGGGGTCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAACCCGGTCCTGGTCGGTGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGTGGAGATGTCCCGACGGAGCTGGCTAAGATGCGGGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACGCGGTTCCGTGGAGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGCCATGTTATCCTCTTCATCGATGAGCTCCATACCATTATGGGATCTGGCTCTGGGATTGACTCTACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGCACCTTGCGGACCGTAGGAGCGACCACGCAAGAAGAATA
CCAAAAACACATTGAAAAAGACGCTGCTCTGTCACGCCGCTTTGCCAAGGTCTTGATTGAGCAACCCTCTGTTGCAGATA
GCATCGCGATTTTGCAAGGGCTCAAGAAGACCTATGAACGTCACCACCGCGTCCATATTACGGATGCGGCTATTGAGACA
GCTGTTGTCTATGCCAATCGTTATTTGACCAGTCGCCTCTTGCCTGACTCCGCCATTGACCTCTTGGATGAAGCAGCAGC
GACCGTGCAAAATGAGGGGCCTCAAGCCGGTCTTCAGTCCGACTTGACAGCTGCTGATCAAGCCTTGCTCAAGGGGCAGT
GGAAAAAAGTTGCTCAGTTGCTAAAAGAAGATGCCAGTCCAAAAGGCTACCAGCTAGAAGTCAAGGAAGAGGATATCCTG
AAGACGCTCAGTCAATTGTCAGGCATTCCTGTGGAGAAACTAACCCAAACAGCGGCTAAGAAATACCTTGAATTGGAAGC
AGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGCCGAGCGATCCGTCGTAATCAGTCGGGAA
TTCGGTCTCACAAGCGGCCGATTGGTTCCTTCCTCTTCCTCGGTCCGACTGGGGTCGGGAAAACCGAGCTTGCCAAGGCC
CTTGCAGAGGTCCTCTTTGATGATGAGTCTGCTTTGATCCGCTTTGACATGAGTGAATATATGGAGAAATTTGCGGCCAG
TCGTCTCAACGGTGCCCCTCCAGGCTATGTCGGTTATGAAGAAGGGGGCGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAATGTTCTCTTGCAAGTCTTGGATGACGGT
GTCTTGACCGACAGCAAGGGACGCAAGGTGGACTTCTCTAATACGATTATAATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACAGTTGGCTTTGGCGCCAAGGATATTCGCTTTGACCAAGCCAATATGGAGAAACGCATCTTTG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCGCTGGTTCAATCTCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCGTCTGCTCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTTAAG
TCTGGTCAGCTTAACTTTACGATTGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus pneumoniae D39 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus pneumoniae TIGR4 |
76.514 |
100 |
0.765 |
| clpC | Streptococcus mutans UA159 |
66.626 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMD-9 |
65.116 |
100 |
0.658 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.116 |
100 |
0.658 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.798 |
100 |
0.502 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.556 |
100 |
0.456 |
| clpE | Streptococcus mutans UA159 |
48.796 |
77.009 |
0.376 |
| clpE | Streptococcus pneumoniae Rx1 |
47.512 |
77.009 |
0.366 |
| clpE | Streptococcus pneumoniae D39 |
47.512 |
77.009 |
0.366 |
| clpE | Streptococcus pneumoniae R6 |
47.512 |
77.009 |
0.366 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.512 |
77.009 |
0.366 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.794 |
79.357 |
0.363 |