Detailed information NTG1120146

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EL100_RS01640
• Genome accession: NZ_LR134285
• Coordinates: 319815..320738 (-)
• Length: 307 a.a.
• NCBI ID: WP_048714745.1
• Uniprot ID: A0A7X2VKX0
• Organism: Streptococcus australis strain NCTC3168
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 314815..325738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL100_RS01640 (NCTC3168_00338)	amiF	319815..320738 (-)	924	WP_048714745.1	ATP-binding cassette domain-containing protein	Regulator
EL100_RS01645 (NCTC3168_00339)	amiE	320748..321815 (-)	1068	WP_126403805.1	ABC transporter ATP-binding protein	Regulator
EL100_RS01650 (NCTC3168_00340)	amiD	321827..322753 (-)	927	WP_048692005.1	oligopeptide ABC transporter permease OppC	Regulator
EL100_RS01655 (NCTC3168_00341)	amiC	322753..324252 (-)	1500	WP_126403804.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34851.97 Da
• Isoelectric Point: 6.1185

>NTDB_id=1120146 EL100_RS01640 WP_048714745.1 319815..320738(-) (amiF) [Streptococcus australis strain NCTC3168]
MTEKLIEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYDGKKINGKQSRK
DENELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFENEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=1120146 EL100_RS01640 WP_048714745.1 319815..320738(-) (amiF) [Streptococcus australis strain NCTC3168]
ATGACAGAAAAATTAATAGAAGTTAAAGATCTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAGTTTGTAGCTGTAAAGAA
TGCAAATTTCTTTATCAATAAAGGGGAAACATTTTCCCTTGTTGGTGAGTCTGGTAGTGGGAAGACCACAATTGGTCGAG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGACATTTTATATGATGGCAAAAAAATCAATGGGAAGCAATCTCGCAAG
GATGAAAATGAATTAATCCGAAAAATTCAAATGATCTTCCAAGACCCAGCAGCTAGCTTGAACGAGCGTGCAACAGTTGA
CTACATTATTTCAGAAGGTTTGTACAATTATCACCTATTTGAAAATGAAGAAGACCGAGTGCGTAAAGTAAAAGAAATTA
TGCATGAAGTAGGGCTTCTAGCAGAGCATTTAACTCGCTATCCCCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGG
ATTGCTCGTGCCCTGGTAATGGAACCAGAATTTGTTATCGCAGATGAACCAATTTCTGCCCTAGACGTATCAGTTCGTGC
ACAAGTATTGAATCTCCTGAAGAAATTCCAAAAAGAATTAGGCTTGACCTATCTCTTTATCGCACACGATCTTTCAGTAG
TTCGATTTATCTCTGATCGTATTGCGGTTATTTACAAAGGGGTTATTGTTGAAGTAGCTGAAACGGAAGAATTGTTTAAC
AATCCAATCCATCCTTATACACAATCTCTACTATCTGCAGTTCCAATTCCAGATCCAATCTTAGAACGCAAAAAAGTTCT
GAAAGTTTATGATCCTGATCAGCATGATTATTCAACTGACAAACCAGAAATGGTTGAAATCAAGCCAGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: A0A7X2VKX0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	84.59	99.349	0.84
amiF	Streptococcus thermophilus LMG 18311	84.262	99.349	0.837
amiF	Streptococcus thermophilus LMD-9	83.934	99.349	0.834