Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   EL100_RS01475 Genome accession   NZ_LR134285
Coordinates   289577..290308 (-) Length   243 a.a.
NCBI ID   WP_126403820.1    Uniprot ID   -
Organism   Streptococcus australis strain NCTC3168     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 284577..295308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL100_RS01440 (NCTC3168_00296) - 284614..284913 (-) 300 WP_126403824.1 YlxQ-related RNA-binding protein -
  EL100_RS01445 (NCTC3168_00297) rnpM 284906..285202 (-) 297 WP_126403823.1 RNase P modulator RnpM -
  EL100_RS01450 (NCTC3168_00298) nusA 285213..286358 (-) 1146 WP_023022285.1 transcription termination factor NusA -
  EL100_RS01455 (NCTC3168_00299) rimP 286404..286892 (-) 489 WP_185759948.1 ribosome maturation factor RimP -
  EL100_RS01460 (NCTC3168_00300) trmB 287058..287693 (-) 636 WP_126403822.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL100_RS01465 (NCTC3168_00301) ccrZ 287690..288484 (-) 795 WP_023022280.1 cell cycle regulator CcrZ -
  EL100_RS01470 (NCTC3168_00302) - 288525..289580 (-) 1056 WP_126403821.1 ABC transporter permease -
  EL100_RS01475 (NCTC3168_00303) pptA 289577..290308 (-) 732 WP_126403820.1 ABC transporter ATP-binding protein Regulator
  EL100_RS01480 (NCTC3168_00304) - 290376..290789 (+) 414 WP_126403819.1 HIT family protein -
  EL100_RS01485 (NCTC3168_00305) - 290803..291099 (+) 297 WP_126403818.1 hypothetical protein -
  EL100_RS01490 (NCTC3168_00306) brpA 291158..292330 (-) 1173 WP_126403817.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL100_RS01495 (NCTC3168_00307) - 292327..292860 (-) 534 WP_126403816.1 GNAT family N-acetyltransferase -
  EL100_RS01500 (NCTC3168_00308) tsaE 292863..293312 (-) 450 WP_126403815.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL100_RS01505 (NCTC3168_00309) - 293434..294855 (-) 1422 WP_126403814.1 NCS2 family permease -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 27001.37 Da        Isoelectric Point: 4.6428

>NTDB_id=1120145 EL100_RS01475 WP_126403820.1 289577..290308(-) (pptA) [Streptococcus australis strain NCTC3168]
MLEIKNLTGGYVNIPVLKDVSFEVGDGQLIGLIGLNGAGKSTTINEIIGLLRPYAGEIRIDGLTLATSPSAYRQKIGYIP
ETPSLYEELTLREHIETVAMAYDLDQEAVFARVTPLLKQFRLEEKLDWFPVHFSKGMKQKVMIICAFAVDPSLFIVDEPF
LGLDPVAISDLIQLLKVEKEKGKSILMSTHVLDSAEKMCDAFVILHKGQVRAQGTLEELRTEFGMADADLNEIYLALTKE
ADR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1120145 EL100_RS01475 WP_126403820.1 289577..290308(-) (pptA) [Streptococcus australis strain NCTC3168]
ATGTTAGAAATAAAAAACCTGACAGGAGGCTATGTCAATATCCCTGTCTTGAAAGATGTTAGTTTTGAGGTTGGCGATGG
TCAATTAATTGGATTGATTGGCTTGAATGGAGCAGGGAAATCAACGACCATAAATGAAATTATAGGTCTACTGCGTCCCT
ATGCTGGCGAAATCCGGATCGATGGTTTGACTTTAGCTACTTCTCCAAGTGCTTATCGCCAAAAAATTGGTTATATTCCT
GAAACACCGAGCCTTTATGAGGAGTTAACCCTGCGTGAGCATATTGAGACAGTGGCGATGGCCTATGACTTGGATCAGGA
AGCAGTTTTTGCGCGTGTGACTCCTCTCTTGAAGCAATTTCGACTAGAGGAAAAATTGGATTGGTTTCCTGTCCATTTTT
CTAAGGGGATGAAACAAAAGGTCATGATTATTTGTGCCTTTGCTGTTGATCCAAGTTTGTTTATTGTCGACGAGCCTTTC
TTAGGTTTGGATCCAGTTGCGATCTCAGATTTAATTCAATTATTGAAGGTGGAAAAAGAGAAGGGGAAATCTATTTTAAT
GAGTACCCATGTGCTGGATTCTGCTGAAAAAATGTGTGATGCCTTTGTCATTCTTCATAAGGGGCAGGTCCGTGCTCAGG
GGACTTTAGAGGAATTGCGGACAGAATTTGGAATGGCAGATGCCGATTTGAATGAAATTTACCTTGCACTAACAAAAGAG
GCGGACCGATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.151

98.354

0.749

  pptA Streptococcus thermophilus LMD-9

75.314

98.354

0.741


Multiple sequence alignment