Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EL070_RS09570 Genome accession   NZ_LR134284
Coordinates   1816584..1817297 (+) Length   237 a.a.
NCBI ID   WP_111705830.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1811584..1822297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS09560 (NCTC8232_01912) treC 1812653..1814281 (-) 1629 WP_126405183.1 alpha,alpha-phosphotrehalase -
  EL070_RS09565 (NCTC8232_01913) treP 1814349..1816373 (-) 2025 WP_126405184.1 PTS system trehalose-specific EIIBC component -
  EL070_RS09570 (NCTC8232_01914) treR 1816584..1817297 (+) 714 WP_111705830.1 trehalose operon repressor Regulator
  EL070_RS09580 (NCTC8232_01915) - 1817575..1817894 (-) 320 Protein_1800 winged helix-turn-helix transcriptional regulator -
  EL070_RS09585 (NCTC8232_01916) - 1818080..1818938 (+) 859 Protein_1801 VOC family protein -
  EL070_RS09590 (NCTC8232_01917) yaaA 1818980..1819711 (+) 732 WP_111705832.1 peroxide stress protein YaaA -
  EL070_RS09595 (NCTC8232_01918) nrdG 1819885..1820499 (-) 615 WP_111705833.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  EL070_RS09600 (NCTC8232_01919) - 1820499..1821008 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  EL070_RS09605 (NCTC8232_01920) - 1821017..1821952 (-) 936 WP_002992828.1 Gfo/Idh/MocA family protein -
  EL070_RS10105 (NCTC8232_01921) - 1821981..1822127 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1120127 EL070_RS09570 WP_111705830.1 1816584..1817297(+) (treR) [Streptococcus pyogenes strain NCTC8232]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKEIHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1120127 EL070_RS09570 WP_111705830.1 1816584..1817297(+) (treR) [Streptococcus pyogenes strain NCTC8232]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTACCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAAATCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment