Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL070_RS07890 Genome accession   NZ_LR134284
Coordinates   1482004..1482813 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477004..1487813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS07880 (NCTC8232_01588) smc 1477340..1480879 (-) 3540 WP_111705501.1 chromosome segregation protein SMC -
  EL070_RS07885 (NCTC8232_01589) rnc 1480880..1481572 (-) 693 WP_002990670.1 ribonuclease III -
  EL070_RS07890 (NCTC8232_01590) vicX 1482004..1482813 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  EL070_RS07895 (NCTC8232_01591) vicK 1482817..1484169 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL070_RS07900 (NCTC8232_01592) vicR 1484162..1484872 (-) 711 WP_002985645.1 response regulator YycF Regulator
  EL070_RS07905 (NCTC8232_01593) - 1485034..1486068 (-) 1035 WP_172453934.1 DUF3114 domain-containing protein -
  EL070_RS07910 (NCTC8232_01594) - 1486124..1487371 (-) 1248 WP_038433654.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1120117 EL070_RS07890 WP_002985641.1 1482004..1482813(-) (vicX) [Streptococcus pyogenes strain NCTC8232]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1120117 EL070_RS07890 WP_002985641.1 1482004..1482813(-) (vicX) [Streptococcus pyogenes strain NCTC8232]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment