Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL078_RS08790 | Genome accession | NZ_LR134282 |
| Coordinates | 1761717..1764158 (-) | Length | 813 a.a. |
| NCBI ID | WP_021143269.1 | Uniprot ID | A0A1G9LNK6 |
| Organism | Streptococcus equinus strain NCTC8140 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1756717..1769158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL078_RS08770 (NCTC8140_01777) | - | 1757529..1758347 (+) | 819 | WP_039691292.1 | hypothetical protein | - |
| EL078_RS08775 (NCTC8140_01778) | - | 1758366..1759640 (+) | 1275 | WP_126438154.1 | toxic anion resistance protein | - |
| EL078_RS08780 (NCTC8140_01779) | hslO | 1759754..1760620 (+) | 867 | WP_074450857.1 | Hsp33 family molecular chaperone HslO | - |
| EL078_RS08785 (NCTC8140_01780) | dusB | 1760613..1761590 (+) | 978 | WP_027968310.1 | tRNA dihydrouridine synthase DusB | - |
| EL078_RS08790 (NCTC8140_01781) | clpC | 1761717..1764158 (-) | 2442 | WP_021143269.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL078_RS08795 (NCTC8140_01782) | - | 1764155..1764616 (-) | 462 | WP_004233448.1 | CtsR family transcriptional regulator | - |
| EL078_RS08800 (NCTC8140_01783) | - | 1764876..1765340 (+) | 465 | WP_021143271.1 | COG2426 family protein | - |
| EL078_RS08805 (NCTC8140_01784) | tsf | 1765714..1766751 (-) | 1038 | WP_024344414.1 | translation elongation factor Ts | - |
| EL078_RS08810 (NCTC8140_01785) | rpsB | 1766858..1767625 (-) | 768 | WP_021143273.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90199.91 Da Isoelectric Point: 6.5810
>NTDB_id=1120001 EL078_RS08790 WP_021143269.1 1761717..1764158(-) (clpC) [Streptococcus equinus strain NCTC8140]
MSEYSMKMQEVFSIAQFQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLSDVKNVQ
FLEQSKALKDVLAFAESICKVTDGTEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSVRLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEADGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVIISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDETSATVQGLVKKKAPEALTDIDKAILEGDFKKATKLLKKSRKVVTRKPAVVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKAYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGDLASGNTLK
IGVSKGQLKFDIA
MSEYSMKMQEVFSIAQFQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLSDVKNVQ
FLEQSKALKDVLAFAESICKVTDGTEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSVRLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEADGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYETFHNVIISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDETSATVQGLVKKKAPEALTDIDKAILEGDFKKATKLLKKSRKVVTRKPAVVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKAYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGDLASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=1120001 EL078_RS08790 WP_021143269.1 1761717..1764158(-) (clpC) [Streptococcus equinus strain NCTC8140]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGCATTGCCCAGTTTCAGGCTGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTTGCTGTTCATGATTCAGTGGCTGGCTTGACGTTTGCTGAATATCAAAATA
AGATTGCCTATGAAGAGTACGAAGCAGCAGCTGTTTTGGCTCTTGGTAAATCACCATTGTCAGATGTGAAAAATGTTCAA
TTTTTAGAACAATCAAAGGCTTTAAAAGACGTGTTGGCGTTTGCTGAGTCTATTTGCAAAGTAACTGACGGTACAGAAAT
CGGAACTGAACACGTGCTTTATGCCATGCTCTTGAATCTTGATTTGTTTGCGACACGTTTGTTAGAAGTTGCTGGATTCA
AAAATAAAGAAGATGGTGACTCAGTTCGCTTACTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAACCTAAAAAAGCTACGATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATTG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCT
GGTGTCGGAAAAACAGCTCTTGCTTATGGTTTGGCACAACGTATTGTTAATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGATTTCGAAGAACGCATGAACCAAA
TCATCTCAGACATTGAAGCTGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAATATCTTAAAACCAGCTCTTGCACGTGGTACACTTCACATGGTTGGTGCGACAAC
ACAAGAAGAATACCAAAAACACATTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCTAAAATTACGATTGAAGAGCCAA
GTGTTGAAGATGCTTATCAGATTCTTCTTGGACTTAAGAAATCTTATGAAACATTCCACAATGTTATCATTTCTGATGAA
GCTGTGCTGACTGCTGTTAAAGCTGCACACCGCTATTTGACAAGCAAAAATCTTCCAGACTCAGCTATTGATTTGCTTGA
TGAAACAAGTGCAACGGTTCAAGGTCTTGTTAAGAAAAAAGCTCCTGAAGCGTTGACTGATATTGATAAAGCTATCTTGG
AAGGTGATTTCAAAAAAGCAACGAAATTGCTTAAAAAATCTCGCAAGGTTGTGACACGTAAGCCAGCAGTTGTCACTGAA
GATGACATTATGGCAACTCTTAGCCGTCTGTCAGGTATTCCTGTTGAGAAAATGACACAAGCCGATAGCAAGAAATATTT
GACGCTTGAAAAAGAACTTCACAAACGTGTTATCGGTCAAGATGCTGCGATTTCTGCTATCAGCCGTGCGATTCGCCGTA
ATCAAGCAGGTATTCGCACAGGTAAACGTCCAATTGGTTCTTTCATGTTCTTAGGACCAACTGGGGTTGGTAAGACAGAG
CTTGCTAAAGCTTTGGCAGAACTTCTTTTTGATGATGAATCTGCGCTTATTCGTTTTGACATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAGGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTCCTTCTATTTGATGAGGTTGAAAAGGCTCACCCAGACATTTTCAATGTGCTTCTTCAAGTC
TTGGATGATGGTGTGTTGACAGACAGTCGTGGTCGTAAAGTTGACTTCTCAAACACTATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAGACTGTTGGATTTGGTGCGCGTGATATGGCTCATGACTATGATGCTATGCAAA
AACGTATCATGGAAGAACTTAAGAAAGCTTATCGTCCTGAGTTTATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAT
TTAACACAAGAAAATATGCGCGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACTTTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATATGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTGATTTGGCAAGCGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGTCAACTCAAATTTGATATTGCTTAA
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGCATTGCCCAGTTTCAGGCTGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTTGCTGTTCATGATTCAGTGGCTGGCTTGACGTTTGCTGAATATCAAAATA
AGATTGCCTATGAAGAGTACGAAGCAGCAGCTGTTTTGGCTCTTGGTAAATCACCATTGTCAGATGTGAAAAATGTTCAA
TTTTTAGAACAATCAAAGGCTTTAAAAGACGTGTTGGCGTTTGCTGAGTCTATTTGCAAAGTAACTGACGGTACAGAAAT
CGGAACTGAACACGTGCTTTATGCCATGCTCTTGAATCTTGATTTGTTTGCGACACGTTTGTTAGAAGTTGCTGGATTCA
AAAATAAAGAAGATGGTGACTCAGTTCGCTTACTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAACCTAAAAAAGCTACGATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATTG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCT
GGTGTCGGAAAAACAGCTCTTGCTTATGGTTTGGCACAACGTATTGTTAATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGATTTCGAAGAACGCATGAACCAAA
TCATCTCAGACATTGAAGCTGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAATATCTTAAAACCAGCTCTTGCACGTGGTACACTTCACATGGTTGGTGCGACAAC
ACAAGAAGAATACCAAAAACACATTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCTAAAATTACGATTGAAGAGCCAA
GTGTTGAAGATGCTTATCAGATTCTTCTTGGACTTAAGAAATCTTATGAAACATTCCACAATGTTATCATTTCTGATGAA
GCTGTGCTGACTGCTGTTAAAGCTGCACACCGCTATTTGACAAGCAAAAATCTTCCAGACTCAGCTATTGATTTGCTTGA
TGAAACAAGTGCAACGGTTCAAGGTCTTGTTAAGAAAAAAGCTCCTGAAGCGTTGACTGATATTGATAAAGCTATCTTGG
AAGGTGATTTCAAAAAAGCAACGAAATTGCTTAAAAAATCTCGCAAGGTTGTGACACGTAAGCCAGCAGTTGTCACTGAA
GATGACATTATGGCAACTCTTAGCCGTCTGTCAGGTATTCCTGTTGAGAAAATGACACAAGCCGATAGCAAGAAATATTT
GACGCTTGAAAAAGAACTTCACAAACGTGTTATCGGTCAAGATGCTGCGATTTCTGCTATCAGCCGTGCGATTCGCCGTA
ATCAAGCAGGTATTCGCACAGGTAAACGTCCAATTGGTTCTTTCATGTTCTTAGGACCAACTGGGGTTGGTAAGACAGAG
CTTGCTAAAGCTTTGGCAGAACTTCTTTTTGATGATGAATCTGCGCTTATTCGTTTTGACATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAGGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTCCTTCTATTTGATGAGGTTGAAAAGGCTCACCCAGACATTTTCAATGTGCTTCTTCAAGTC
TTGGATGATGGTGTGTTGACAGACAGTCGTGGTCGTAAAGTTGACTTCTCAAACACTATTATTATCATGACGTCAAACCT
TGGTGCGACAGCTCTTCGTGATGATAAGACTGTTGGATTTGGTGCGCGTGATATGGCTCATGACTATGATGCTATGCAAA
AACGTATCATGGAAGAACTTAAGAAAGCTTATCGTCCTGAGTTTATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAT
TTAACACAAGAAAATATGCGCGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACTTTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATATGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTGATTTGGCAAGCGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGTCAACTCAAATTTGATATTGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
78.079 |
99.877 |
0.78 |
| clpC | Streptococcus thermophilus LMG 18311 |
73.865 |
100 |
0.74 |
| clpC | Streptococcus thermophilus LMD-9 |
73.742 |
100 |
0.739 |
| clpC | Streptococcus pneumoniae TIGR4 |
68.103 |
99.877 |
0.68 |
| clpC | Streptococcus pneumoniae Rx1 |
68.103 |
99.877 |
0.68 |
| clpC | Streptococcus pneumoniae D39 |
68.103 |
99.877 |
0.68 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.216 |
100 |
0.502 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.855 |
100 |
0.448 |