Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL078_RS06880 Genome accession   NZ_LR134282
Coordinates   1379100..1379909 (-) Length   269 a.a.
NCBI ID   WP_021142843.1    Uniprot ID   A0A1G9KLS3
Organism   Streptococcus equinus strain NCTC8140     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1374100..1384909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL078_RS06870 (NCTC8140_01393) smc 1374517..1378056 (-) 3540 WP_126438023.1 chromosome segregation protein SMC -
  EL078_RS06875 (NCTC8140_01394) rnc 1378203..1378889 (-) 687 WP_021142842.1 ribonuclease III -
  EL078_RS06880 (NCTC8140_01395) vicX 1379100..1379909 (-) 810 WP_021142843.1 MBL fold metallo-hydrolase Regulator
  EL078_RS06885 (NCTC8140_01396) vicK 1379910..1381262 (-) 1353 WP_045797686.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL078_RS06890 (NCTC8140_01397) vicR 1381255..1381965 (-) 711 WP_021142846.1 response regulator YycF Regulator
  EL078_RS06895 (NCTC8140_01398) - 1382273..1383037 (+) 765 WP_024343734.1 amino acid ABC transporter ATP-binding protein -
  EL078_RS06900 (NCTC8140_01399) - 1383042..1383851 (+) 810 WP_126438024.1 transporter substrate-binding domain-containing protein -
  EL078_RS06905 (NCTC8140_01400) - 1383867..1384571 (+) 705 WP_039698014.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30229.07 Da        Isoelectric Point: 5.1978

>NTDB_id=1119987 EL078_RS06880 WP_021142843.1 1379100..1379909(-) (vicX) [Streptococcus equinus strain NCTC8140]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDTAQKHVFERGKVLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFAVGHDMTVFDTSPDEATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1119987 EL078_RS06880 WP_021142843.1 1379100..1379909(-) (vicX) [Streptococcus equinus strain NCTC8140]
ATGTCTGAGAATGCTTTTAAATATAGTGTCTTAGCTTCCGGTTCTACTGGTAACTCATTTTATGTGGAAACGCCACAAAA
ACGTCTTTTGATTGATGCAGGGTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGATATTGATCGAAAACCAGAAGATT
TGGATGCTATTTTAATTACACACGAACATTCCGACCATATTAAGGGTGTTGGAGTGCTTGCTCGTCGTTACAATCTTGAT
GTTTATGCCAATGAAAAAACTTGGCAAATGATTGATGAGCGCAATATGATTGGAAAACTTGACACTGCTCAGAAACATGT
TTTTGAGCGTGGCAAAGTATTGACTTTCGGTGATATTGATATTGAAAGTTTCGGAGTTAGCCACGATGCGGTTGATCCAC
AATTTTACCGTTTGATGAAAGATAATAAATCATTTGTTGTTTTGACTGATACGGGCTATGTTAGTGATAGAATGGCTGGC
GTCATTGAAAATGCAGATGGCTATTTGATTGAGTCAAATCACGATGTTGAGATATTGCGTGCGGGTTCTTATCCATGGAG
CTTAAAACAACGTATCTTATCTGATAGAGGGCATTTATCAAATGAAGATGGTGCAGATACGATGATTCGCACCATTGGTA
ATCGTACGAAAAAAATCTATCTTGGTCACTTGAGTAAGGAAAATAATATCAAAGAACTAGCTCACATGACTATGGAAAAT
AATTTGATGCAAGCTGATTTTGCGGTTGGACACGACATGACTGTCTTTGATACGTCACCGGATGAAGCAACGCCATTAAC
TGAAATCTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G9KLS3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment