Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL078_RS01955 Genome accession   NZ_LR134282
Coordinates   360507..361232 (+) Length   241 a.a.
NCBI ID   WP_039691903.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8140     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 355507..366232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL078_RS01925 (NCTC8140_00384) - 355929..357350 (+) 1422 WP_074484022.1 NCS2 family permease -
  EL078_RS01930 (NCTC8140_00385) tsaE 357516..357959 (+) 444 WP_024344600.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL078_RS01935 (NCTC8140_00386) - 357952..358464 (+) 513 WP_126437605.1 GNAT family N-acetyltransferase -
  EL078_RS01940 (NCTC8140_00387) brpA 358475..359641 (+) 1167 WP_126437606.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL078_RS01945 (NCTC8140_00388) - 359713..360027 (-) 315 WP_021141714.1 hypothetical protein -
  EL078_RS01950 (NCTC8140_00389) - 360024..360443 (-) 420 WP_021141715.1 HIT family protein -
  EL078_RS01955 (NCTC8140_00390) pptA 360507..361232 (+) 726 WP_039691903.1 ABC transporter ATP-binding protein Regulator
  EL078_RS01960 (NCTC8140_00391) - 361235..362269 (+) 1035 WP_126437607.1 ABC transporter permease -
  EL078_RS01965 (NCTC8140_00392) ccrZ 362303..363136 (+) 834 WP_045798213.1 cell cycle regulator CcrZ -
  EL078_RS01970 (NCTC8140_00393) trmB 363136..363774 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL078_RS01975 (NCTC8140_00394) - 364076..364552 (+) 477 WP_186330474.1 hypothetical protein -
  EL078_RS01980 (NCTC8140_00395) - 364494..365432 (+) 939 Protein_324 hypothetical protein -
  EL078_RS01985 (NCTC8140_00396) rimP 365639..366136 (+) 498 WP_024344612.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26674.05 Da        Isoelectric Point: 4.8609

>NTDB_id=1119962 EL078_RS01955 WP_039691903.1 360507..361232(+) (pptA) [Streptococcus equinus strain NCTC8140]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANNQADYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELREAFGQKDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1119962 EL078_RS01955 WP_039691903.1 360507..361232(+) (pptA) [Streptococcus equinus strain NCTC8140]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGGCTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGCTAATAATCAAGCTGATTATCGTAAAAAAATTGGATTTATTCCT
GAAACACCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAACTGTTGCTATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGTTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGTGCTTTCATGGTTAATCCAAGTCTGTTTATTGTTGATGAGCCGTTT
TTAGGATTGGATCCGTTGGCTATTTCTGATTTGACAGATTTGCTTGCGCAAGAAAAAGCTAAAGGTAAGGCGATTTTGAT
GTCGACACACGTGTTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTAGCTGAATTGCGAGAAGCTTTCGGTCAGAAAGACGCTAGCTTAAATGATATCTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

Multiple sequence alignment