Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL076_RS09900 Genome accession   NZ_LR134275
Coordinates   1949300..1950067 (+) Length   255 a.a.
NCBI ID   WP_064519422.1    Uniprot ID   A0AAW7QFK9
Organism   Streptococcus vestibularis strain NCTC12167     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1944300..1955067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS09865 - 1944885..1946099 (+) 1215 Protein_1858 ISL3 family transposase -
  EL076_RS09885 (NCTC12167_01961) - 1946627..1947310 (-) 684 WP_048787910.1 YoaK family protein -
  EL076_RS09890 (NCTC12167_01962) rlmH 1947326..1947805 (-) 480 WP_064519445.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL076_RS09895 (NCTC12167_01963) htrA 1947999..1949234 (+) 1236 WP_064519421.1 S1C family serine protease Regulator
  EL076_RS09900 (NCTC12167_01964) spo0J 1949300..1950067 (+) 768 WP_064519422.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29428.89 Da        Isoelectric Point: 9.6540

>NTDB_id=1119921 EL076_RS09900 WP_064519422.1 1949300..1950067(+) (spo0J) [Streptococcus vestibularis strain NCTC12167]
MSEQLKTLPISEIYPNPFQPRLEFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
KVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELAYSHEELAKAMGKSRPYISNTLRLLQLPREIQTSIENGSLSQG
HARALLAVEDSRKQLTIFQQVLAERWSVRTLEKKLQELPRKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKTHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1119921 EL076_RS09900 WP_064519422.1 1949300..1950067(+) (spo0J) [Streptococcus vestibularis strain NCTC12167]
ATGTCAGAACAACTCAAAACTTTACCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAGAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAGTCAATATCAGAAAATGGTTTAATACAACCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGTGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
AAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCAAATCTCAATCCTATCGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAGCTTACAGTCACGAGGAACTCGCTAAAGCTATGGGGAAATCTAGACCAT
ATATTAGTAACACTCTTAGACTACTACAACTTCCGCGAGAGATACAAACTAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTGTTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTTTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAAGAACTTCCTAGAAAACAAAAATCTAAAAAAGATATCCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTAGGTCTTCCCGTAACTCTACGTTATCACAAAACTCACTCGGGAACGATTCAAATACAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58

Multiple sequence alignment