Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL077_RS05390 | Genome accession | NZ_LR134273 |
| Coordinates | 1142075..1144168 (+) | Length | 697 a.a. |
| NCBI ID | WP_126436749.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. equi strain NCTC12091 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1137075..1149168
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL077_RS05370 (NCTC12091_01090) | - | 1137275..1138558 (-) | 1284 | WP_126436745.1 | homoserine dehydrogenase | - |
| EL077_RS05375 (NCTC12091_01091) | - | 1138729..1139694 (+) | 966 | WP_043030836.1 | polysaccharide deacetylase family protein | - |
| EL077_RS05380 (NCTC12091_01092) | - | 1139979..1140785 (-) | 807 | WP_126436747.1 | DNA/RNA non-specific endonuclease | - |
| EL077_RS05385 (NCTC12091_01093) | ndk | 1141285..1141704 (-) | 420 | WP_012515690.1 | nucleoside-diphosphate kinase | - |
| EL077_RS05390 (NCTC12091_01094) | clpC | 1142075..1144168 (+) | 2094 | WP_126436749.1 | AAA family ATPase | Regulator |
| EL077_RS05395 (NCTC12091_01095) | hupY | 1144354..1147365 (-) | 3012 | WP_126436751.1 | leucine-rich repeat adhesin HupY/LrrG | - |
| EL077_RS05400 (NCTC12091_01097) | yihA | 1147738..1148337 (-) | 600 | WP_126437219.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 697 a.a. Molecular weight: 76657.62 Da Isoelectric Point: 5.1707
>NTDB_id=1119758 EL077_RS05390 WP_126436749.1 1142075..1144168(+) (clpC) [Streptococcus equi subsp. equi strain NCTC12091]
MTTYYGKDPFGNMDDIFNQLMGNIGGYRSENRHYLVNGREMTPEEFQEYRKTGKLAATEGQDKQAGSLKKDGILTKLGTN
LTEEARQGRLDPVIGRNDEIQATAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEENIQNMVKEVKEAGNIILFFDEIHQILGAGSAGSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHNVILPDSVLKAAIDYAIQYIPQRSLPDKAIDLVDMTAAHLAAQH
PVTDLKSLEAEIAKQKELQEKAVAAEDFEKALTAKTRIEELQKQINHHSEGQKVTATVNDIAESVERLTGVPVSNMGAND
LERLKEISNRLKGHVIGQDGAVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNQNTLTERVRRSPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTINFKNTVI
IATSNAGFGHQAGDSADQEPAIMERIAPYFRPEFLNRFNGVIEFNHLAKKDLQEIVALMLAEVNQTLAKKGISLEVTDDV
KERLIDLGYDHAMGVRPLRHVIEQEIRDRITDYYLDHPTAKHLLASLDQDTITISEK
MTTYYGKDPFGNMDDIFNQLMGNIGGYRSENRHYLVNGREMTPEEFQEYRKTGKLAATEGQDKQAGSLKKDGILTKLGTN
LTEEARQGRLDPVIGRNDEIQATAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEENIQNMVKEVKEAGNIILFFDEIHQILGAGSAGSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFHILMGIRNLYEQHHNVILPDSVLKAAIDYAIQYIPQRSLPDKAIDLVDMTAAHLAAQH
PVTDLKSLEAEIAKQKELQEKAVAAEDFEKALTAKTRIEELQKQINHHSEGQKVTATVNDIAESVERLTGVPVSNMGAND
LERLKEISNRLKGHVIGQDGAVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNQNTLTERVRRSPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTINFKNTVI
IATSNAGFGHQAGDSADQEPAIMERIAPYFRPEFLNRFNGVIEFNHLAKKDLQEIVALMLAEVNQTLAKKGISLEVTDDV
KERLIDLGYDHAMGVRPLRHVIEQEIRDRITDYYLDHPTAKHLLASLDQDTITISEK
Nucleotide
Download Length: 2094 bp
>NTDB_id=1119758 EL077_RS05390 WP_126436749.1 1142075..1144168(+) (clpC) [Streptococcus equi subsp. equi strain NCTC12091]
ATGACAACTTATTATGGAAAAGACCCCTTTGGAAATATGGACGATATTTTCAATCAATTAATGGGAAACATTGGTGGCTA
TCGCAGTGAAAATCGGCACTATCTTGTCAATGGACGTGAGATGACACCAGAGGAATTTCAGGAATACCGGAAAACCGGTA
AGCTAGCTGCAACTGAAGGACAAGACAAACAGGCTGGTAGCCTTAAAAAAGACGGCATTCTAACCAAGCTCGGAACAAAT
CTGACTGAAGAAGCTCGTCAAGGAAGGCTAGATCCTGTCATCGGACGAAACGATGAGATTCAAGCAACCGCAGAAATTCT
AGCTAGGCGAACCAAGAATAACCCTGTGCTTGTCGGTGACGCTGGCGTTGGTAAAACTGCTGTTGTCGAAGGTTTAGCCC
AGGCTATCGTCAATGGTGATGTGCCAGCTGCTATCAAAAATAAAGAGATTATCTCAATTGATATTTCTGGCCTTGAGGCT
GGCACACAGTATCGTGGCTCCTTTGAAGAAAACATTCAAAACATGGTTAAAGAGGTTAAAGAGGCTGGTAATATTATCCT
CTTCTTTGACGAAATTCATCAAATTCTTGGTGCAGGGTCAGCTGGTTCAGATTCAGGCTCTAAGGGCTTGGCTGATATTC
TAAAGCCAGCCCTCTCACGCGGTGAGTTGACCTTGATTGGTGCCACAACTCAAGATGAGTATCGCAATACTATTTTAAAA
AATGCTGCCCTTGCTCGTCGTTTCAACGAGGTTAAGGTTAATGCTCCTTCAGCAGAGGATACCTTCCACATTTTGATGGG
CATTCGCAACCTCTACGAGCAGCACCACAATGTGATCCTGCCAGATTCTGTCTTAAAAGCAGCTATTGATTATGCTATCC
AATATATTCCACAACGAAGCCTGCCTGATAAAGCCATTGACCTTGTTGATATGACGGCTGCCCACCTAGCAGCTCAGCAC
CCTGTCACTGATCTAAAGTCACTTGAAGCAGAAATCGCTAAGCAAAAGGAGCTACAGGAAAAGGCTGTTGCAGCAGAAGA
CTTTGAAAAGGCCTTGACTGCTAAGACACGCATTGAGGAGCTCCAAAAGCAAATCAATCATCACAGTGAAGGGCAAAAGG
TCACTGCCACCGTCAATGACATTGCAGAATCTGTTGAACGACTAACTGGTGTCCCAGTCTCAAATATGGGGGCTAATGAT
TTAGAAAGGCTCAAAGAAATCAGTAATCGTCTTAAAGGCCATGTTATCGGACAAGATGGTGCAGTTGAGGCTGTTGCTCG
TGCGATTCGACGCAATAGAGCAGGCTTTGATGATGGCAATCGTCCAATTGGCTCCTTCCTTTTTGTTGGTCCGACTGGTG
TCGGCAAGACCGAGCTGGCTAAGCAGTTAGCCCTTGATATGTTCGGCTCAAAGGACGCTATCATTCGCTTAGACATGTCT
GAATATAGTGACCGCACAGCTGTTTCCAAATTAATCGGAACAACAGCTGGCTATGTTGGCTATGATGATAATCAAAATAC
CCTTACAGAACGTGTCCGTCGCAGTCCTTACTCTATCATCTTGCTTGATGAAATCGAAAAAGCAGACCCACAGGTCATTA
CACTGCTTCTTCAAGTGCTTGATGATGGGCGATTGACAGATGGACAAGGCAACACGATCAATTTCAAAAATACGGTTATC
ATCGCAACCTCTAATGCTGGTTTTGGCCATCAAGCAGGAGATAGTGCTGATCAAGAGCCTGCTATCATGGAGCGTATTGC
ACCTTACTTTAGACCAGAATTCTTGAATCGCTTCAACGGTGTCATCGAATTCAACCATTTAGCGAAAAAGGATCTACAAG
AAATCGTTGCTTTAATGCTAGCAGAGGTGAACCAAACCCTTGCTAAAAAAGGGATTAGCCTTGAGGTGACTGATGATGTT
AAAGAGCGTTTGATTGATCTGGGCTATGATCATGCGATGGGAGTTCGTCCACTTAGACATGTCATCGAACAAGAAATTCG
TGACCGTATTACTGACTACTACCTGGATCACCCGACTGCTAAACACCTATTAGCAAGTCTTGATCAAGATACTATTACGA
TAAGTGAGAAGTAA
ATGACAACTTATTATGGAAAAGACCCCTTTGGAAATATGGACGATATTTTCAATCAATTAATGGGAAACATTGGTGGCTA
TCGCAGTGAAAATCGGCACTATCTTGTCAATGGACGTGAGATGACACCAGAGGAATTTCAGGAATACCGGAAAACCGGTA
AGCTAGCTGCAACTGAAGGACAAGACAAACAGGCTGGTAGCCTTAAAAAAGACGGCATTCTAACCAAGCTCGGAACAAAT
CTGACTGAAGAAGCTCGTCAAGGAAGGCTAGATCCTGTCATCGGACGAAACGATGAGATTCAAGCAACCGCAGAAATTCT
AGCTAGGCGAACCAAGAATAACCCTGTGCTTGTCGGTGACGCTGGCGTTGGTAAAACTGCTGTTGTCGAAGGTTTAGCCC
AGGCTATCGTCAATGGTGATGTGCCAGCTGCTATCAAAAATAAAGAGATTATCTCAATTGATATTTCTGGCCTTGAGGCT
GGCACACAGTATCGTGGCTCCTTTGAAGAAAACATTCAAAACATGGTTAAAGAGGTTAAAGAGGCTGGTAATATTATCCT
CTTCTTTGACGAAATTCATCAAATTCTTGGTGCAGGGTCAGCTGGTTCAGATTCAGGCTCTAAGGGCTTGGCTGATATTC
TAAAGCCAGCCCTCTCACGCGGTGAGTTGACCTTGATTGGTGCCACAACTCAAGATGAGTATCGCAATACTATTTTAAAA
AATGCTGCCCTTGCTCGTCGTTTCAACGAGGTTAAGGTTAATGCTCCTTCAGCAGAGGATACCTTCCACATTTTGATGGG
CATTCGCAACCTCTACGAGCAGCACCACAATGTGATCCTGCCAGATTCTGTCTTAAAAGCAGCTATTGATTATGCTATCC
AATATATTCCACAACGAAGCCTGCCTGATAAAGCCATTGACCTTGTTGATATGACGGCTGCCCACCTAGCAGCTCAGCAC
CCTGTCACTGATCTAAAGTCACTTGAAGCAGAAATCGCTAAGCAAAAGGAGCTACAGGAAAAGGCTGTTGCAGCAGAAGA
CTTTGAAAAGGCCTTGACTGCTAAGACACGCATTGAGGAGCTCCAAAAGCAAATCAATCATCACAGTGAAGGGCAAAAGG
TCACTGCCACCGTCAATGACATTGCAGAATCTGTTGAACGACTAACTGGTGTCCCAGTCTCAAATATGGGGGCTAATGAT
TTAGAAAGGCTCAAAGAAATCAGTAATCGTCTTAAAGGCCATGTTATCGGACAAGATGGTGCAGTTGAGGCTGTTGCTCG
TGCGATTCGACGCAATAGAGCAGGCTTTGATGATGGCAATCGTCCAATTGGCTCCTTCCTTTTTGTTGGTCCGACTGGTG
TCGGCAAGACCGAGCTGGCTAAGCAGTTAGCCCTTGATATGTTCGGCTCAAAGGACGCTATCATTCGCTTAGACATGTCT
GAATATAGTGACCGCACAGCTGTTTCCAAATTAATCGGAACAACAGCTGGCTATGTTGGCTATGATGATAATCAAAATAC
CCTTACAGAACGTGTCCGTCGCAGTCCTTACTCTATCATCTTGCTTGATGAAATCGAAAAAGCAGACCCACAGGTCATTA
CACTGCTTCTTCAAGTGCTTGATGATGGGCGATTGACAGATGGACAAGGCAACACGATCAATTTCAAAAATACGGTTATC
ATCGCAACCTCTAATGCTGGTTTTGGCCATCAAGCAGGAGATAGTGCTGATCAAGAGCCTGCTATCATGGAGCGTATTGC
ACCTTACTTTAGACCAGAATTCTTGAATCGCTTCAACGGTGTCATCGAATTCAACCATTTAGCGAAAAAGGATCTACAAG
AAATCGTTGCTTTAATGCTAGCAGAGGTGAACCAAACCCTTGCTAAAAAAGGGATTAGCCTTGAGGTGACTGATGATGTT
AAAGAGCGTTTGATTGATCTGGGCTATGATCATGCGATGGGAGTTCGTCCACTTAGACATGTCATCGAACAAGAAATTCG
TGACCGTATTACTGACTACTACCTGGATCACCCGACTGCTAAACACCTATTAGCAAGTCTTGATCAAGATACTATTACGA
TAAGTGAGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.063 |
100 |
0.481 |
| clpE | Streptococcus mutans UA159 |
48.023 |
97.991 |
0.471 |
| clpE | Streptococcus pneumoniae Rx1 |
50.635 |
90.387 |
0.458 |
| clpE | Streptococcus pneumoniae D39 |
50.635 |
90.387 |
0.458 |
| clpE | Streptococcus pneumoniae R6 |
50.635 |
90.387 |
0.458 |
| clpE | Streptococcus pneumoniae TIGR4 |
50.635 |
90.387 |
0.458 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.673 |
89.527 |
0.409 |
| clpC | Streptococcus mutans UA159 |
43.065 |
88.953 |
0.383 |
| clpC | Streptococcus pneumoniae Rx1 |
43.514 |
87.374 |
0.38 |
| clpC | Streptococcus pneumoniae D39 |
43.514 |
87.374 |
0.38 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.35 |
87.374 |
0.379 |
| clpC | Streptococcus thermophilus LMD-9 |
42.557 |
88.666 |
0.377 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.395 |
88.666 |
0.376 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.326 |
88.809 |
0.376 |