Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL077_RS02885 Genome accession   NZ_LR134273
Coordinates   592193..593230 (+) Length   345 a.a.
NCBI ID   WP_014622492.1    Uniprot ID   A0A6D2LSH8
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 587193..598230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS02860 (NCTC12091_00580) - 587506..588837 (+) 1332 WP_126436449.1 dipeptidase -
  EL077_RS02865 (NCTC12091_00581) arcC 588855..589805 (+) 951 WP_111689942.1 carbamate kinase -
  EL077_RS02870 (NCTC12091_00582) asnA 590025..591017 (+) 993 WP_126436451.1 aspartate--ammonia ligase -
  EL077_RS02875 (NCTC12091_00583) rsmD 591186..591725 (+) 540 WP_111692279.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL077_RS02880 (NCTC12091_00584) coaD 591715..592215 (+) 501 WP_111692280.1 pantetheine-phosphate adenylyltransferase -
  EL077_RS02885 (NCTC12091_00585) sepM 592193..593230 (+) 1038 WP_014622492.1 SepM family pheromone-processing serine protease Regulator
  EL077_RS02890 (NCTC12091_00586) - 593850..594464 (+) 615 WP_111692281.1 YutD family protein -
  EL077_RS02895 (NCTC12091_00587) rlmN 594468..595550 (+) 1083 WP_126436453.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EL077_RS02900 (NCTC12091_00588) - 595973..596422 (-) 450 WP_228269161.1 peptidase -
  EL077_RS02905 (NCTC12091_00589) - 596822..597352 (+) 531 WP_012515230.1 Dps family protein -
  EL077_RS02910 (NCTC12091_00590) - 597725..597958 (+) 234 WP_012515231.1 YqgQ family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37450.05 Da        Isoelectric Point: 9.2833

>NTDB_id=1119747 EL077_RS02885 WP_014622492.1 592193..593230(+) (sepM) [Streptococcus equi subsp. equi strain NCTC12091]
MKTIKKFKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1119747 EL077_RS02885 WP_014622492.1 592193..593230(+) (sepM) [Streptococcus equi subsp. equi strain NCTC12091]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6D2LSH8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.145

100

0.701


Multiple sequence alignment