Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL077_RS02230 Genome accession   NZ_LR134273
Coordinates   445587..446312 (+) Length   241 a.a.
NCBI ID   WP_111677796.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 440587..451312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS02200 (NCTC12091_00445) tsaE 441132..441575 (+) 444 WP_126436371.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL077_RS02205 (NCTC12091_00446) - 441568..442095 (+) 528 WP_126436373.1 GNAT family N-acetyltransferase -
  EL077_RS02210 (NCTC12091_00447) brpA 442096..443358 (+) 1263 WP_126436375.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL077_RS02215 (NCTC12091_00448) - 443522..443824 (-) 303 WP_043029409.1 hypothetical protein -
  EL077_RS02220 (NCTC12091_00449) - 443821..444240 (-) 420 WP_111677795.1 HIT family protein -
  EL077_RS02225 (NCTC12091_00450) - 444697..445050 (-) 354 WP_126436377.1 hypothetical protein -
  EL077_RS02230 (NCTC12091_00451) pptA 445587..446312 (+) 726 WP_111677796.1 ABC transporter ATP-binding protein Regulator
  EL077_RS02235 (NCTC12091_00452) - 446316..447350 (+) 1035 WP_012679097.1 ABC transporter permease -
  EL077_RS02240 (NCTC12091_00453) ccrZ 447413..448204 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  EL077_RS02245 (NCTC12091_00454) trmB 448204..448839 (+) 636 WP_126436379.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL077_RS02260 (NCTC12091_00456) - 450171..451289 (+) 1119 WP_111692134.1 ISAs1-like element ISSeq10 family transposase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26522.80 Da        Isoelectric Point: 4.8615

>NTDB_id=1119746 EL077_RS02230 WP_111677796.1 445587..446312(+) (pptA) [Streptococcus equi subsp. equi strain NCTC12091]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKSKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1119746 EL077_RS02230 WP_111677796.1 445587..446312(+) (pptA) [Streptococcus equi subsp. equi strain NCTC12091]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCCTGTATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTACGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGTTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGTCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

99.17

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726

Multiple sequence alignment