Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   EL071_RS10605 Genome accession   NZ_LR134265
Coordinates   2050143..2050868 (-) Length   241 a.a.
NCBI ID   WP_115356945.1    Uniprot ID   A0AB38VQT0
Organism   Streptococcus agalactiae strain NCTC8184     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2045143..2055868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL071_RS10570 (NCTC8184_02106) - 2045154..2045450 (-) 297 WP_001140526.1 YlxR family protein -
  EL071_RS10575 (NCTC8184_02107) nusA 2045472..2046623 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  EL071_RS10580 (NCTC8184_02108) rimP 2046659..2047135 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  EL071_RS10590 (NCTC8184_02110) trmB 2047624..2048259 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EL071_RS10595 (NCTC8184_02111) - 2048249..2049049 (-) 801 WP_115356943.1 phosphotransferase family protein -
  EL071_RS10600 (NCTC8184_02112) - 2049107..2050141 (-) 1035 WP_115356944.1 ABC transporter permease -
  EL071_RS10605 (NCTC8184_02113) pptA 2050143..2050868 (-) 726 WP_115356945.1 ABC transporter ATP-binding protein Regulator
  EL071_RS10610 - 2050940..2051126 (+) 187 Protein_1981 hypothetical protein -
  EL071_RS10615 (NCTC8184_02114) - 2051178..2051681 (-) 504 WP_115356946.1 hypothetical protein -
  EL071_RS10620 (NCTC8184_02115) - 2052017..2052436 (+) 420 WP_000368099.1 HIT family protein -
  EL071_RS10625 (NCTC8184_02116) - 2052433..2052729 (+) 297 WP_115356947.1 hypothetical protein -
  EL071_RS10630 (NCTC8184_02117) - 2052793..2054100 (-) 1308 WP_115356948.1 LCP family protein -
  EL071_RS10635 (NCTC8184_02118) - 2054109..2054630 (-) 522 WP_164993776.1 GNAT family N-acetyltransferase -
  EL071_RS10640 (NCTC8184_02119) tsaE 2054623..2055066 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26862.33 Da        Isoelectric Point: 4.6310

>NTDB_id=1119528 EL071_RS10605 WP_115356945.1 2050143..2050868(-) (pptA) [Streptococcus agalactiae strain NCTC8184]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARVQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1119528 EL071_RS10605 WP_115356945.1 2050143..2050868(-) (pptA) [Streptococcus agalactiae strain NCTC8184]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGTGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763

  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759


Multiple sequence alignment