Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL020_RS08250 Genome accession   NZ_LR134203
Coordinates   1626171..1627256 (-) Length   361 a.a.
NCBI ID   WP_058833201.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC11436     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1621171..1632256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL020_RS08225 (NCTC11436_01761) - 1622131..1622637 (-) 507 WP_020916349.1 VanZ family protein -
  EL020_RS08230 (NCTC11436_01762) rlmN 1622647..1623747 (-) 1101 WP_020916348.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EL020_RS08235 (NCTC11436_01763) - 1623768..1624329 (-) 562 Protein_1623 YutD family protein -
  EL020_RS08240 (NCTC11436_01764) - 1624359..1625687 (-) 1329 WP_058833200.1 bifunctional metallophosphatase/5'-nucleotidase -
  EL020_RS08245 (NCTC11436_01765) - 1625792..1626040 (-) 249 WP_043894978.1 DUF3923 family protein -
  EL020_RS08250 (NCTC11436_01766) sepM 1626171..1627256 (-) 1086 WP_058833201.1 SepM family pheromone-processing serine protease Regulator
  EL020_RS08255 (NCTC11436_01767) coaD 1627234..1627731 (-) 498 WP_058833202.1 pantetheine-phosphate adenylyltransferase -
  EL020_RS08260 (NCTC11436_01768) rsmD 1627763..1628302 (-) 540 WP_058814365.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL020_RS08265 (NCTC11436_01769) - 1628434..1629276 (+) 843 WP_058813701.1 hypothetical protein -
  EL020_RS08270 (NCTC11436_01770) - 1629448..1630182 (+) 735 WP_081048437.1 hypothetical protein -
  EL020_RS08275 (NCTC11436_01771) asnA 1630286..1631278 (-) 993 WP_020916339.1 aspartate--ammonia ligase -
  EL020_RS09490 - 1631838..1632137 (-) 300 Protein_1632 macrolide ABC transporter permease -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39251.51 Da        Isoelectric Point: 5.4865

>NTDB_id=1118980 EL020_RS08250 WP_058833201.1 1626171..1627256(-) (sepM) [Streptococcus lutetiensis strain NCTC11436]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFLIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVN
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTIQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFIPNNPVDKETLKK
NPDAKTNYEEAKEAAKSLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=1118980 EL020_RS08250 WP_058833201.1 1626171..1627256(-) (sepM) [Streptococcus lutetiensis strain NCTC11436]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTCTTATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGCGGTGCTTATG
ATGTTCGTAGTGTTTTGACTGTTAATAACAAAACAGATAAAGATGAAGGCTCTTATAACTTTGTAGCGGTGACGGTGAAT
CAAGCGACGCTTGCTCAGCTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGGGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACTTACCAAGCTTTAA
CCCTAGCAGGAAAAGATGTTAAGCTTGATTATCAGGGTGTTTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGAAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTATTCAAGAAATTTCAAATGGTAAAACAAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGCATTGGTTTAGTCGATCATACCAAGGTGTCATCTGATGTCGATGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGACCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTATTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
AATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAAGCCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACTTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.552

93.906

0.634


Multiple sequence alignment