Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | EL020_RS06705 | Genome accession | NZ_LR134203 |
| Coordinates | 1303230..1305002 (-) | Length | 590 a.a. |
| NCBI ID | WP_020916923.1 | Uniprot ID | A0AB33AM80 |
| Organism | Streptococcus lutetiensis strain NCTC11436 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1282578..1323414 | 1303230..1305002 | within | 0 |
Gene organization within MGE regions
Location: 1282578..1323414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL020_RS06585 (NCTC11436_01387) | yihA | 1282578..1283171 (-) | 594 | WP_043895055.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| EL020_RS06590 (NCTC11436_01388) | clpX | 1283182..1284411 (-) | 1230 | WP_020916897.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| EL020_RS06600 (NCTC11436_01390) | - | 1284638..1285132 (-) | 495 | WP_020916898.1 | dihydrofolate reductase | - |
| EL020_RS06605 (NCTC11436_01391) | - | 1285215..1286054 (-) | 840 | WP_126402585.1 | thymidylate synthase | - |
| EL020_RS06610 (NCTC11436_01392) | - | 1286382..1287557 (+) | 1176 | WP_020916900.1 | hydroxymethylglutaryl-CoA synthase | - |
| EL020_RS06615 (NCTC11436_01393) | - | 1287547..1288818 (+) | 1272 | WP_058813992.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| EL020_RS06620 (NCTC11436_01394) | - | 1288981..1289424 (+) | 444 | WP_020916902.1 | DUF1836 domain-containing protein | - |
| EL020_RS06625 (NCTC11436_01395) | trhA | 1289414..1290070 (+) | 657 | WP_020916903.1 | PAQR family membrane homeostasis protein TrhA | - |
| EL020_RS06630 (NCTC11436_01396) | fni | 1290093..1291091 (-) | 999 | WP_111698839.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| EL020_RS06635 (NCTC11436_01397) | - | 1291088..1292086 (-) | 999 | WP_043895056.1 | phosphomevalonate kinase | - |
| EL020_RS06640 (NCTC11436_01398) | mvaD | 1292088..1293023 (-) | 936 | WP_058832946.1 | diphosphomevalonate decarboxylase | - |
| EL020_RS06645 (NCTC11436_01399) | mvk | 1293005..1293883 (-) | 879 | WP_111698845.1 | mevalonate kinase | - |
| EL020_RS06650 (NCTC11436_01400) | - | 1293996..1294754 (-) | 759 | WP_126402586.1 | amino acid ABC transporter ATP-binding protein | - |
| EL020_RS06655 (NCTC11436_01401) | - | 1294773..1295453 (-) | 681 | WP_058813998.1 | amino acid ABC transporter permease | - |
| EL020_RS06660 (NCTC11436_01402) | - | 1295464..1296156 (-) | 693 | WP_058813999.1 | amino acid ABC transporter permease | - |
| EL020_RS06665 (NCTC11436_01403) | - | 1296166..1297044 (-) | 879 | WP_111712854.1 | transporter substrate-binding domain-containing protein | - |
| EL020_RS06670 (NCTC11436_01404) | - | 1297096..1298127 (-) | 1032 | WP_058814001.1 | uroporphyrinogen decarboxylase family protein | - |
| EL020_RS06680 (NCTC11436_01406) | - | 1298714..1299628 (+) | 915 | WP_020916918.1 | LysR family transcriptional regulator | - |
| EL020_RS06685 (NCTC11436_01407) | - | 1299690..1300535 (+) | 846 | WP_020916919.1 | aldo/keto reductase | - |
| EL020_RS06690 (NCTC11436_01408) | - | 1300577..1301803 (-) | 1227 | WP_020916920.1 | sensor histidine kinase | - |
| EL020_RS06695 (NCTC11436_01409) | - | 1301812..1302492 (-) | 681 | WP_126402587.1 | response regulator transcription factor | - |
| EL020_RS06700 (NCTC11436_01410) | - | 1302495..1303130 (-) | 636 | WP_020916922.1 | GTP pyrophosphokinase family protein | - |
| EL020_RS06705 (NCTC11436_01411) | rcrQ | 1303230..1305002 (-) | 1773 | WP_020916923.1 | ABC transporter ATP-binding protein | Regulator |
| EL020_RS06710 (NCTC11436_01412) | rcrP | 1304992..1306806 (-) | 1815 | WP_020916924.1 | ABC transporter ATP-binding protein | Regulator |
| EL020_RS06715 (NCTC11436_01413) | rcrR | 1306810..1307250 (-) | 441 | WP_043895256.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| EL020_RS06720 (NCTC11436_01414) | - | 1307395..1307805 (-) | 411 | WP_020916926.1 | peptide deformylase | - |
| EL020_RS09910 | - | 1307802..1308014 (-) | 213 | WP_228380533.1 | GNAT family N-acetyltransferase | - |
| EL020_RS09915 (NCTC11436_01415) | - | 1307996..1308310 (-) | 315 | WP_228380475.1 | hypothetical protein | - |
| EL020_RS06730 (NCTC11436_01416) | gdhA | 1308468..1309817 (-) | 1350 | WP_043895060.1 | NADP-specific glutamate dehydrogenase | - |
| EL020_RS06735 (NCTC11436_01417) | - | 1310054..1310551 (+) | 498 | WP_043895061.1 | HdeD family acid-resistance protein | - |
| EL020_RS06740 (NCTC11436_01418) | queF | 1310588..1311079 (-) | 492 | WP_058814005.1 | preQ(1) synthase | - |
| EL020_RS06745 | queE | 1311229..1311948 (-) | 720 | Protein_1319 | 7-carboxy-7-deazaguanine synthase QueE | - |
| EL020_RS06750 (NCTC11436_01421) | queD | 1311941..1312387 (-) | 447 | WP_061407985.1 | 6-carboxytetrahydropterin synthase QueD | - |
| EL020_RS06755 (NCTC11436_01422) | queC | 1312387..1313040 (-) | 654 | Protein_1321 | 7-cyano-7-deazaguanine synthase QueC | - |
| EL020_RS06760 (NCTC11436_01423) | - | 1313205..1314974 (-) | 1770 | WP_020916931.1 | ABC transporter ATP-binding protein | - |
| EL020_RS06765 (NCTC11436_01424) | - | 1314977..1316716 (-) | 1740 | WP_020916932.1 | ABC transporter ATP-binding protein | - |
| EL020_RS06770 (NCTC11436_01425) | - | 1316979..1317506 (-) | 528 | WP_126402588.1 | hypothetical protein | - |
| EL020_RS06775 (NCTC11436_01426) | - | 1317546..1319414 (-) | 1869 | WP_126402589.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EL020_RS06780 (NCTC11436_01427) | - | 1319411..1320616 (-) | 1206 | WP_020916935.1 | CCA tRNA nucleotidyltransferase | - |
| EL020_RS06785 (NCTC11436_01428) | dapB | 1320613..1321380 (-) | 768 | WP_020916936.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| EL020_RS06790 (NCTC11436_01429) | - | 1321405..1322253 (-) | 849 | WP_020916937.1 | DegV family protein | - |
| EL020_RS06795 (NCTC11436_01430) | - | 1322253..1322633 (-) | 381 | WP_020916938.1 | DUF1149 family protein | - |
| EL020_RS06800 (NCTC11436_01431) | - | 1322755..1323414 (-) | 660 | WP_020916939.1 | glucosaminidase domain-containing protein | - |
Sequence
Protein
Download Length: 590 a.a. Molecular weight: 65326.44 Da Isoelectric Point: 4.9659
>NTDB_id=1118971 EL020_RS06705 WP_020916923.1 1303230..1305002(-) (rcrQ) [Streptococcus lutetiensis strain NCTC11436]
MENKKKVSFYGRMEPYIKGFQFPFILAVIGAIISATVTVIGPDKLKEITNTIMKGLTPTKMGTIPGVDLDKVGQIALTLA
ILYVISAVIGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSVVL
LIGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSQAFKI
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMSYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDESHKERQLSDVKGEVTFDNVFFGYSRDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTRLMSREEVHDQFAMVLQDTWLFEGTIKENLIYNQENITNEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA
MENKKKVSFYGRMEPYIKGFQFPFILAVIGAIISATVTVIGPDKLKEITNTIMKGLTPTKMGTIPGVDLDKVGQIALTLA
ILYVISAVIGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSVVL
LIGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSQAFKI
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMSYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDESHKERQLSDVKGEVTFDNVFFGYSRDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTRLMSREEVHDQFAMVLQDTWLFEGTIKENLIYNQENITNEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA
Nucleotide
Download Length: 1773 bp
>NTDB_id=1118971 EL020_RS06705 WP_020916923.1 1303230..1305002(-) (rcrQ) [Streptococcus lutetiensis strain NCTC11436]
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGGAGCCATACATTAAAGGTTTCCAATTTCCATTTATCCTTGC
GGTAATTGGAGCCATTATTTCAGCGACTGTTACTGTTATTGGTCCTGATAAATTAAAAGAAATTACAAATACCATTATGA
AAGGCTTGACACCAACTAAAATGGGGACTATCCCTGGTGTTGACCTAGATAAGGTTGGGCAAATTGCTTTAACTCTTGCT
ATTTTATATGTGATTTCTGCAGTTATTGGTTATATTCAAAACTTTACAGTAGCTACCATCGTTCAACGTTTCTCTCAACG
TTTGCGTGCAGCTATCCAAGTTAAAATTGACCGTGTGCCGCTAAATTATTTTGATAGTCATTCACAAGGGGATACTCTTT
CTCGTGTGACAAATGACGTGGATTTGCTTGGTCAGTCTCTTAACCAAAGTTTGGGAACATTGGTCACTTCAGTAGTACTT
TTGATTGGTTCGATTTTCATGATGTTCCATTCAAATGTCAGCATGGCACTAACAGCAATTGGTTCGGTCTTTATCGGATT
CTTGCTAGTTGTTGTGATTATGGGGTCATCACAACCCTTGTTTAAACGCCAACAAAATAACTTGGCAGCAGTTAATGGTT
ATGTCGAAGAAATCTATTCTGGCCATAATGTAGTGACAAGCTATAACGCTTCTGAAGAAACTAGCCAAGCATTTAAAATT
CTTAACACAAATCTCTATAAATCAATGTGGCAATCGCAATTCTTATCAGGTATTATGATGCCGCTCATGATTTTCATTGG
TAACTTTGGTTATGTGATGGTCTGTGTAGTTGGTGCGGTTAAGGTGATTAATGGCGATATTACCATGGGTGATGTGGTTG
CCTTTATGAGTTACGTGCGTATTTTCTCACAACCTCTTTCTCAAATTGCTCAAGCTTTCACACAAATGCAATCAGCAACA
GCCGCTATGAGTCGTGTTTTTGAATTTCTTGAAGAAGAGGAAATGGAAGATGAATCACACAAAGAACGTCAATTGTCTGA
TGTTAAAGGTGAAGTTACTTTTGATAATGTCTTCTTTGGTTATTCTAGAGATAAAACCATTATCCATGATTTCTCTGCCG
TGGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGACCAACTGGTGCTGGTAAGACAACCATCGTTAACCTTCTTATGAAA
TTCTATGAAATTGATAAAGGTCAAATTGCTATCGATGGTGTTGACACACGTTTGATGTCACGAGAAGAAGTCCATGACCA
ATTTGCAATGGTACTTCAAGATACTTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAATATCA
CTAATGAACAAGTAGTAGCAGCAGCTAAAGCAGTTGGTGTTCATCACTTTATCATGACGCTTCCTGATGGCTATGACACA
TACCTTGATGACTCTGTTACCCTTTCAATCGGTCAAAAACAACTCTTGACCATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTCGATACACGTACGGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACCTCGTTTGTCATTGCTCACCGTTTATCAACGATTAAAAATGCTGACTTAATCCTTGTGATGAAAGAT
GGTAACATCATCGAGCAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCTTAA
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGGAGCCATACATTAAAGGTTTCCAATTTCCATTTATCCTTGC
GGTAATTGGAGCCATTATTTCAGCGACTGTTACTGTTATTGGTCCTGATAAATTAAAAGAAATTACAAATACCATTATGA
AAGGCTTGACACCAACTAAAATGGGGACTATCCCTGGTGTTGACCTAGATAAGGTTGGGCAAATTGCTTTAACTCTTGCT
ATTTTATATGTGATTTCTGCAGTTATTGGTTATATTCAAAACTTTACAGTAGCTACCATCGTTCAACGTTTCTCTCAACG
TTTGCGTGCAGCTATCCAAGTTAAAATTGACCGTGTGCCGCTAAATTATTTTGATAGTCATTCACAAGGGGATACTCTTT
CTCGTGTGACAAATGACGTGGATTTGCTTGGTCAGTCTCTTAACCAAAGTTTGGGAACATTGGTCACTTCAGTAGTACTT
TTGATTGGTTCGATTTTCATGATGTTCCATTCAAATGTCAGCATGGCACTAACAGCAATTGGTTCGGTCTTTATCGGATT
CTTGCTAGTTGTTGTGATTATGGGGTCATCACAACCCTTGTTTAAACGCCAACAAAATAACTTGGCAGCAGTTAATGGTT
ATGTCGAAGAAATCTATTCTGGCCATAATGTAGTGACAAGCTATAACGCTTCTGAAGAAACTAGCCAAGCATTTAAAATT
CTTAACACAAATCTCTATAAATCAATGTGGCAATCGCAATTCTTATCAGGTATTATGATGCCGCTCATGATTTTCATTGG
TAACTTTGGTTATGTGATGGTCTGTGTAGTTGGTGCGGTTAAGGTGATTAATGGCGATATTACCATGGGTGATGTGGTTG
CCTTTATGAGTTACGTGCGTATTTTCTCACAACCTCTTTCTCAAATTGCTCAAGCTTTCACACAAATGCAATCAGCAACA
GCCGCTATGAGTCGTGTTTTTGAATTTCTTGAAGAAGAGGAAATGGAAGATGAATCACACAAAGAACGTCAATTGTCTGA
TGTTAAAGGTGAAGTTACTTTTGATAATGTCTTCTTTGGTTATTCTAGAGATAAAACCATTATCCATGATTTCTCTGCCG
TGGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGACCAACTGGTGCTGGTAAGACAACCATCGTTAACCTTCTTATGAAA
TTCTATGAAATTGATAAAGGTCAAATTGCTATCGATGGTGTTGACACACGTTTGATGTCACGAGAAGAAGTCCATGACCA
ATTTGCAATGGTACTTCAAGATACTTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAATATCA
CTAATGAACAAGTAGTAGCAGCAGCTAAAGCAGTTGGTGTTCATCACTTTATCATGACGCTTCCTGATGGCTATGACACA
TACCTTGATGACTCTGTTACCCTTTCAATCGGTCAAAAACAACTCTTGACCATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTCGATACACGTACGGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACCTCGTTTGTCATTGCTCACCGTTTATCAACGATTAAAAATGCTGACTTAATCCTTGTGATGAAAGAT
GGTAACATCATCGAGCAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
72.635 |
100 |
0.729 |