Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL020_RS02450 | Genome accession | NZ_LR134203 |
| Coordinates | 488144..490585 (-) | Length | 813 a.a. |
| NCBI ID | WP_126402378.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC11436 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 483144..495585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL020_RS02435 (NCTC11436_00502) | - | 485032..485919 (-) | 888 | WP_126402377.1 | helix-turn-helix transcriptional regulator | - |
| EL020_RS02440 (NCTC11436_00503) | hslO | 486222..487088 (+) | 867 | WP_043895138.1 | Hsp33 family molecular chaperone HslO | - |
| EL020_RS02445 (NCTC11436_00504) | dusB | 487081..488058 (+) | 978 | WP_020917566.1 | tRNA dihydrouridine synthase DusB | - |
| EL020_RS02450 (NCTC11436_00505) | clpC | 488144..490585 (-) | 2442 | WP_126402378.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL020_RS02455 (NCTC11436_00506) | - | 490582..491043 (-) | 462 | WP_039696152.1 | CtsR family transcriptional regulator | - |
| EL020_RS02460 (NCTC11436_00507) | - | 491301..491765 (+) | 465 | WP_058814309.1 | COG2426 family protein | - |
| EL020_RS02465 (NCTC11436_00508) | tsf | 491865..492902 (-) | 1038 | WP_020917570.1 | translation elongation factor Ts | - |
| EL020_RS02470 (NCTC11436_00509) | rpsB | 493011..493778 (-) | 768 | WP_043895139.1 | 30S ribosomal protein S2 | - |
| EL020_RS02480 (NCTC11436_00511) | - | 494331..495284 (+) | 954 | WP_126402379.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90143.67 Da Isoelectric Point: 6.2743
>NTDB_id=1118943 EL020_RS02450 WP_126402378.1 488144..490585(-) (clpC) [Streptococcus lutetiensis strain NCTC11436]
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLAFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKRSYETFHNVMISDD
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEIPSDLTPADQAILEGDFKKATKLLKALRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKITQADSKKYLTLEKELHKRIIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGNLASGNTLK
IGVSKGQLKFDIA
MSEYSMKMQEVFSIAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQNKIAYEEYEAAAVLALGKSPLADVKNVQ
FLEQSKALKDVLAFAESICKVTGSTEVGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDSARLLDLRKSLSRNAGFTKE
KIKAIHDLRKPKKATMGGAFSEMMKPQSTAGELSDFTRDLTELARQGKLEPVIGREKEVSRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVDGEIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHIEKDAALSRRFAKITIEEPSVEDAYQILLGLKRSYETFHNVMISDD
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEIPSDLTPADQAILEGDFKKATKLLKALRKAVTRKPTAVTE
DDIMATLSRLSGIPVEKITQADSKKYLTLEKELHKRIIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDMAHDYDAMQKRIMEELKKTYRPEFINRIDEKVVFHH
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEAGYDPEMGARPLRRTIQDKVEDKLSELILSGNLASGNTLK
IGVSKGQLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=1118943 EL020_RS02450 WP_126402378.1 488144..490585(-) (clpC) [Streptococcus lutetiensis strain NCTC11436]
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCGGCTGTTTTGGCGCTCGGAAAATCACCTTTGGCAGATGTGAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAGCTTTTGCTGAATCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAGCCTAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCC
GGTGTCGGAAAAACGGCTCTTGCTTATGGTTTGGCACAACGTATTGTCGATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGACTTTGAGGAGCGCATGAACCAAA
TCATCTCAGATATCGAAGAAGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAACATCTTAAAACCAGCTCTTGCGCGCGGTACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAGATTTTACTTGGACTTAAAAGATCTTACGAAACTTTCCACAATGTAATGATTTCTGATGAT
GCTGTGTTGACAGCAGTTAAAGCTGCCCACCGTTATTTGACAAGTAAGAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAATACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATTACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATCATGGCAACTCTTAGCCGTTTGTCAGGTATTCCTGTTGAAAAAATAACGCAAGCTGATAGTAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTATTATTGGTCAAGATGCTGCAATTTCTGCCATTAGCCGTGCTATTCGTCGAA
ATCAAGCTGGTATCCGTACAGGAAAACGTCCAATTGGTTCATTTATGTTCTTAGGACCAACAGGTGTTGGTAAGACAGAA
TTAGCTAAGGCTTTAGCAGAGCTACTTTTTGATGATGAATCAGCACTTATCCGCTTTGATATGTCTGAATACATGGAAAA
ATTTGCAGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAAGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAATGTCTTACTTCAAGTC
TTGGATGATGGCGTGTTGACAGATAGTCGTGGTCGTAAAGTTGACTTCTCAAATACTATTATTATCATGACGTCAAACCT
TGGTGCAACTGCCCTTCGTGATGATAAGACAGTTGGATTTGGGGCGCGTGACATGGCTCATGATTACGATGCTATGCAAA
AACGCATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAC
CTAACACAAGAAAATATGCGTGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACATTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTAATTTGGCAAGTGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGACAACTCAAATTTGATATTGCATAA
ATGAGTGAATATTCAATGAAAATGCAGGAGGTTTTCAGTATCGCCCAGTATCAGGCGGCGCGATTTGAAAGCCCATATTT
AGAAAGTTGGCATGTGCTTTTAGCCATGGTAGCTGTTCATGATTCAGTGGCAGGGTTAACATTTGCTGAATACCAAAATA
AGATTGCTTACGAAGAGTACGAAGCGGCGGCTGTTTTGGCGCTCGGAAAATCACCTTTGGCAGATGTGAAAAATGTGCAG
TTCTTAGAACAATCTAAAGCCCTAAAAGACGTCTTAGCTTTTGCTGAATCAATTTGCAAAGTGACTGGCAGCACTGAAGT
CGGAACAGAGCATGTCCTTTATGCTATGTTGTTGAATCTCGATTTGTTTGCGACACGTCTTTTGGAAGTTGCTGGATTTA
AAAATAAAGAAGATGGTGATTCAGCACGCTTGCTTGATTTACGTAAATCATTGTCACGTAATGCTGGATTTACCAAAGAA
AAAATCAAAGCTATCCATGATCTTCGTAAGCCTAAAAAAGCTACAATGGGCGGAGCTTTCTCAGAAATGATGAAACCTCA
GTCAACTGCGGGAGAATTATCAGACTTCACTCGTGATTTGACTGAATTAGCTCGTCAAGGAAAACTTGAGCCAGTTATCG
GACGTGAAAAAGAAGTCTCTCGCATGGTTCAAGTACTTAGCCGTAAGACTAAAAATAATCCTGTCTTAGTTGGTGAAGCC
GGTGTCGGAAAAACGGCTCTTGCTTATGGTTTGGCACAACGTATTGTCGATGGTGAAATTCCTTATGAACTCCAAGATAT
GCGTGTCTTAGAGCTTGATATGATGAGTGTTGTTGCGGGGACTCGTTTCCGTGGTGACTTTGAGGAGCGCATGAACCAAA
TCATCTCAGATATCGAAGAAGATGGTCATATTATTTTGTTTATCGATGAAGTCCACACTATCATGGGTTCTGGTTCAGGT
ATTGATAGTACTTTGGATGCTGCTAACATCTTAAAACCAGCTCTTGCGCGCGGTACACTTCACATGGTTGGTGCGACAAC
TCAAGAAGAATATCAAAAACATATCGAAAAAGATGCAGCTCTTTCACGTCGTTTTGCGAAAATTACGATTGAAGAACCAA
GTGTTGAAGATGCTTATCAGATTTTACTTGGACTTAAAAGATCTTACGAAACTTTCCACAATGTAATGATTTCTGATGAT
GCTGTGTTGACAGCAGTTAAAGCTGCCCACCGTTATTTGACAAGTAAGAATCTACCAGACTCAGCTATTGATTTGCTTGA
TGAAGCTAGTGCAACCGTTCAAGGTTTGGTGAAAAAAGAAATACCTTCTGACTTAACTCCAGCTGACCAAGCTATCTTAG
AAGGTGATTTCAAAAAAGCTACAAAATTGCTAAAAGCATTACGTAAAGCTGTGACACGTAAGCCAACAGCTGTGACAGAA
GATGACATCATGGCAACTCTTAGCCGTTTGTCAGGTATTCCTGTTGAAAAAATAACGCAAGCTGATAGTAAGAAATATTT
GACGCTTGAAAAAGAATTGCACAAACGTATTATTGGTCAAGATGCTGCAATTTCTGCCATTAGCCGTGCTATTCGTCGAA
ATCAAGCTGGTATCCGTACAGGAAAACGTCCAATTGGTTCATTTATGTTCTTAGGACCAACAGGTGTTGGTAAGACAGAA
TTAGCTAAGGCTTTAGCAGAGCTACTTTTTGATGATGAATCAGCACTTATCCGCTTTGATATGTCTGAATACATGGAAAA
ATTTGCAGCGAGTCGTCTTAACGGAGCGCCTCCAGGATATGTTGGCTATGAAGAAGGTGGAGAACTTACAGAAAAAGTTC
GTAACAAACCTTATTCAGTGCTTCTTTTTGATGAGGTTGAAAAAGCTCACCCAGATATTTTCAATGTCTTACTTCAAGTC
TTGGATGATGGCGTGTTGACAGATAGTCGTGGTCGTAAAGTTGACTTCTCAAATACTATTATTATCATGACGTCAAACCT
TGGTGCAACTGCCCTTCGTGATGATAAGACAGTTGGATTTGGGGCGCGTGACATGGCTCATGATTACGATGCTATGCAAA
AACGCATCATGGAAGAGCTTAAGAAAACTTATCGTCCAGAATTCATCAACCGTATTGATGAAAAAGTTGTCTTCCACCAC
CTAACACAAGAAAATATGCGTGATGTTGTTAAAATTATGGTTAAACCATTGATTGCAACATTGGCTGAAAAAGATATCAC
ACTTAAATTCCAACCATCAGCGCTTAAATACCTTGCTGAAGCTGGATACGACCCAGAAATGGGTGCTCGTCCACTTCGCC
GTACTATTCAAGATAAAGTCGAAGATAAACTATCTGAACTTATCCTATCAGGTAATTTGGCAAGTGGAAATACTCTTAAA
ATTGGTGTTTCAAAAGGACAACTCAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.094 |
99.877 |
0.77 |
| clpC | Streptococcus thermophilus LMG 18311 |
73.988 |
100 |
0.742 |
| clpC | Streptococcus thermophilus LMD-9 |
73.988 |
100 |
0.742 |
| clpC | Streptococcus pneumoniae Rx1 |
67.734 |
99.877 |
0.677 |
| clpC | Streptococcus pneumoniae D39 |
67.734 |
99.877 |
0.677 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.734 |
99.877 |
0.677 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.1 |
100 |
0.503 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.923 |
100 |
0.449 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae Rx1 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae D39 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus pneumoniae R6 |
45.866 |
78.844 |
0.362 |
| clpE | Streptococcus mutans UA159 |
47.496 |
76.138 |
0.362 |