Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | EL064_RS16410 | Genome accession | NZ_LR134178 |
| Coordinates | 3810396..3811085 (-) | Length | 229 a.a. |
| NCBI ID | WP_101898928.1 | Uniprot ID | A0A2H5FI02 |
| Organism | Legionella sainthelensi strain NCTC12450 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3805396..3816085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL064_RS16385 (NCTC12450_03465) | pyk | 3805678..3807096 (+) | 1419 | WP_101898925.1 | pyruvate kinase | - |
| EL064_RS16395 (NCTC12450_03467) | - | 3807417..3807905 (+) | 489 | WP_101898926.1 | hypothetical protein | - |
| EL064_RS16400 (NCTC12450_03468) | - | 3808299..3808964 (+) | 666 | WP_128130351.1 | hypothetical protein | - |
| EL064_RS16405 (NCTC12450_03469) | - | 3809081..3810202 (+) | 1122 | WP_128130352.1 | hypothetical protein | - |
| EL064_RS16410 (NCTC12450_03470) | rocC | 3810396..3811085 (-) | 690 | WP_101898928.1 | ProQ/FinO family protein | Regulator |
| EL064_RS16415 (NCTC12450_03471) | - | 3811377..3811583 (+) | 207 | WP_035905888.1 | hypothetical protein | - |
| EL064_RS16420 (NCTC12450_03472) | dapB | 3811602..3812333 (+) | 732 | WP_128130353.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| EL064_RS16425 (NCTC12450_03473) | - | 3812374..3814848 (-) | 2475 | WP_115702630.1 | oxidoreductase | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 25742.57 Da Isoelectric Point: 10.4497
>NTDB_id=1118821 EL064_RS16410 WP_101898928.1 3810396..3811085(-) (rocC) [Legionella sainthelensi strain NCTC12450]
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAAHFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSAEEAEYAAAKIKKRVEKSARNARKLLAEKTVNPSSPNPQGMSYHSKITNQS
SNTTDDHFPIYPTRASYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKEIIEE
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAAHFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSAEEAEYAAAKIKKRVEKSARNARKLLAEKTVNPSSPNPQGMSYHSKITNQS
SNTTDDHFPIYPTRASYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKEIIEE
Nucleotide
Download Length: 690 bp
>NTDB_id=1118821 EL064_RS16410 WP_101898928.1 3810396..3811085(-) (rocC) [Legionella sainthelensi strain NCTC12450]
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAGAAAAATAAGTCTAAAAAAGCGCGAACAGA
TGCTTTGTTATGGCTCGCTGCACATTTTCCTGCAGCATTTGATAATTCATTACGAATTCGCCCATTAAAAATAGGTATTA
TGGATGATATTTTGCTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTAAGAGAGGCTGTGGTGTTA
TTTACTCGCCGCCTTGATTATTTAGCTTGCCTCAAGCTTCGAGAAATGCGAATTGATTTGCAAGGCAATGATGTGGGTGA
GGTGAGTGCTGAGGAAGCTGAATATGCAGCTGCCAAGATTAAAAAACGTGTTGAAAAAAGTGCTCGTAATGCACGTAAAC
TTCTCGCAGAAAAAACTGTAAATCCTTCTAGTCCTAATCCTCAAGGCATGAGTTATCACTCAAAAATAACAAATCAGTCA
TCAAACACAACAGATGATCATTTTCCAATTTATCCAACACGAGCTAGTTACAATGCATTGAATGCAACGACACAACCTGT
TCGAACTACTGCTGTAGTGGTAAAGCATAAATCGGCAAAACAATATGATCCTGATGCTGTCGCTCGTTTGAAAGAAAAAT
TAGGATTGTCTAGAAATTCCGAAGAGAAAAAAGAAATTATTGAAGAGTAA
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAGAAAAATAAGTCTAAAAAAGCGCGAACAGA
TGCTTTGTTATGGCTCGCTGCACATTTTCCTGCAGCATTTGATAATTCATTACGAATTCGCCCATTAAAAATAGGTATTA
TGGATGATATTTTGCTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTAAGAGAGGCTGTGGTGTTA
TTTACTCGCCGCCTTGATTATTTAGCTTGCCTCAAGCTTCGAGAAATGCGAATTGATTTGCAAGGCAATGATGTGGGTGA
GGTGAGTGCTGAGGAAGCTGAATATGCAGCTGCCAAGATTAAAAAACGTGTTGAAAAAAGTGCTCGTAATGCACGTAAAC
TTCTCGCAGAAAAAACTGTAAATCCTTCTAGTCCTAATCCTCAAGGCATGAGTTATCACTCAAAAATAACAAATCAGTCA
TCAAACACAACAGATGATCATTTTCCAATTTATCCAACACGAGCTAGTTACAATGCATTGAATGCAACGACACAACCTGT
TCGAACTACTGCTGTAGTGGTAAAGCATAAATCGGCAAAACAATATGATCCTGATGCTGTCGCTCGTTTGAAAGAAAAAT
TAGGATTGTCTAGAAATTCCGAAGAGAAAAAAGAAATTATTGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
65.975 |
100 |
0.694 |